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Name : SeD_A1234 (SeD_A1234) Accession : YP_002215086.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Unknown Product : Vgr family type VI secretion system Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 1227373 - 1229487 bp Length : 2115 bp Strand : + Note : identified by match to protein family HMM PF04524; match to protein family HMM TIGR01646 DNA sequence : ATGTCAACAGGATTACGTTTCACACTGGAGGTGGACGGCCTGCCATCGGATGCGCTGGTCGTGGAGTCCTTTCACCTGAG CCAGTCCCTTTCCACGTTATTTTCCCTCGATATCTCGCTGGTCAGTCAGCAACTTCACAACATTGAGTTTGCCCAGGTAC TGGAAAAACCGGCGCACCTGAAAATCTGGCAGGGCACGGAGATACAGCGCCGGGTGAACGGCATAGTGACCTGGTTTGAG CAGGGGGAAAACGACGGACACCAGATGCTGTACAGCATGAAAGTTCGTCCGCCGGTGTGGCGCGCCGCGCTGCGGCAGAA CTCGCGTATTTTCCAGAATGAAGACATAAAAAGCATTCTCGGGACGATACTGCAGGAAAACGGCGTGACGGACTGGAGCC CGCTGTTCAGTGAGGCGCATCCGGCGCGGGAGTTCTGCGTGCAGTACAGCGAAACGGATTACGACTTTCTGGCGCGGATG GCGGCGGAGGAAGGTATTTTCTTTTACGAGGAACATGCGCAGACCAGCGACGACCAGAGCCTGGTGCTGTGCGACACGGT ACGTTTTCTGCCGGAAGCCTTTGAAATCCCCTGGAACCCGAACACCCGTACCGAGGTGAGCACGCCGTGCGTCAGCCAGT TCCGCCACAGCGCGCAAATCCGCCCCTCTTCCGTCATCGGCAAGGACTACACCTTCAAACGCCCCGGCTGGGCGGGCCGC TTTGAGCACCAGGGCGAACATCAGGATTACCAGCGCACGCAGTATGAGGTCTTTGATTATCCGGGGCGCTTCAAGGACGG CCACGGTCAGAACTTCGCCCGCTGGCAGATGGAAGGCTGGCGTAATAATGCCGAAGTGGCGCAGGGGAAAAGCCGTTCGC CGGCGATATGGCCGGGACGGCGTATTCAGCTGACGGAACACCCGCAGGCGAGCCTGAACCGGGAATGGCAGGTGGTGAGC AGCGATTTACACGGCAGCCAGCCGCAGGCGGCGGCGGGGCGCTCAGGTTCAGGGACAACGCTGGACAATCATTTTACGGT CATCCCGGCAGACAGAACATGGCGGCCACGCCCGCTGCCCAAACCATCAGTGGACGGCCCGCAGTCGGCGGTGGTCACCG GCCCGGAAGGGGAAGAAATCTTCTGCGACGAACATGGCCGTGTACGGGTGAAATTTAACTGGGACCGGTATAACCCGGCG AACCAGGACAGCTCGTGCTGGATACGGGTGGTACAGGCGTGGGCGGGGCCGGGGTTCGGCAACCTGGCGATACCGCGCGT GGGGCAGGAAGTGATAGTGGACTTCCTCAACGGCGACCCGGACCAGCCCATCATCATGGGGCGCACCTACCACCAGGAAA ACCGCTCACCGGGCAGCCTGCCGGGCACCAAAACGCAGATGACCATCCGCTCGAAAACCTATAAAGGCAGCGGGTTTAAC GAACTCATGTTTGATGATGCGACAGGGAAGGAGCGCGTGTATATCCACGCGCAGAAGAATATGAATACCGAGGTGCTGCG CAACCGCACCACCGATGTGACGAATAATCATGCTGAAACCATTGGTAATAACCAGGTGATCGCCGTTACCAATAACCAAA TCCAGACCATCGGCGTCAACCAGGTGGAGAAGGTGGGCAGTAACCAGGTGATCAAGGTGGGTGCCAATCAGGTGGAAACG GTGGGGATTGTCCGCGCCCTGAATGTGGGGCTGGCATACCAGACTACCGTGGGCGGCATCATGAATACCTCGGTGGCGCT GATGCAGTCTTCTGAGGTCGGGATCTTCAAATCACTGAATGTGGGAATGAAATACAACGTCAATGTCGGGCGTAATGCCA GCGTTAACGTGGGCAACAGTAAAACCGAAAGTACCGGTAAAACGGCGGTGTATTCCGCAGGCGAGCATCTGGAACTGGTG TGTGGTGAAGCCCGTCTGGTGCTGACGAGCGACGGCGGTATTTTTCTGAACGGCAAACATATTGAGTTGCAGGGCGTGGA CAGCTTAAACGGGGATTCAAAGCTGATCAGCTGGAACTGTGGGGTGAGCAAGAAGCCACCTGAAGCATCTGAACAGCAGG ATGACCCCGATCCATCGGATCTGATCATGTACTGA Protein sequence : MSTGLRFTLEVDGLPSDALVVESFHLSQSLSTLFSLDISLVSQQLHNIEFAQVLEKPAHLKIWQGTEIQRRVNGIVTWFE QGENDGHQMLYSMKVRPPVWRAALRQNSRIFQNEDIKSILGTILQENGVTDWSPLFSEAHPAREFCVQYSETDYDFLARM AAEEGIFFYEEHAQTSDDQSLVLCDTVRFLPEAFEIPWNPNTRTEVSTPCVSQFRHSAQIRPSSVIGKDYTFKRPGWAGR FEHQGEHQDYQRTQYEVFDYPGRFKDGHGQNFARWQMEGWRNNAEVAQGKSRSPAIWPGRRIQLTEHPQASLNREWQVVS SDLHGSQPQAAAGRSGSGTTLDNHFTVIPADRTWRPRPLPKPSVDGPQSAVVTGPEGEEIFCDEHGRVRVKFNWDRYNPA NQDSSCWIRVVQAWAGPGFGNLAIPRVGQEVIVDFLNGDPDQPIIMGRTYHQENRSPGSLPGTKTQMTIRSKTYKGSGFN ELMFDDATGKERVYIHAQKNMNTEVLRNRTTDVTNNHAETIGNNQVIAVTNNQIQTIGVNQVEKVGSNQVIKVGANQVET VGIVRALNVGLAYQTTVGGIMNTSVALMQSSEVGIFKSLNVGMKYNVNVGRNASVNVGNSKTESTGKTAVYSAGEHLELV CGEARLVLTSDGGIFLNGKHIELQGVDSLNGDSKLISWNCGVSKKPPEASEQQDDPDPSDLIMY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 3e-169 | 54 |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 3e-169 | 54 |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 3e-142 | 51 |
