Gene Information

Name : SeD_A1226 (SeD_A1226)
Accession : YP_002215078.1
Strain : Salmonella enterica CT_02021853
Genome accession: NC_011205
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 1220414 - 1221502 bp
Length : 1089 bp
Strand : -
Note : identified by match to protein family HMM PF06996

DNA sequence : 
ATGGGCGGAAAGAACCGGGCAACACCCGCTCATCTGAGTCCGGACGATGCTCCGGCGCAGGATGAACAACGCACGCTGCG
GGAGCCGTTGTTTCAGGACGCCTGCGCCTGCAATTTTTTCGCGCTCTCTGAGCTGCTGCACCGGCTGGCATCAGAAGGCG
GCGAAACGCCAGTGTTATCCCTGGATACCCCTCCGGCGCAGGAAACCATTCGTTTCCAGGCGGACGCCAGCCTGGGATTT
CCGGTAAGCGATGTCAGCGCGCTGGAGCAGGATGCTTCCGGGTTGTTCCGGATGACCACCACCTTTATGGGATTGCAGGG
CAGCCAGTCGCCCCTCCCCGGCTATTACCTTGATCACCTGGCCTGGAAATCCGCGCACGAGCAGAGTCCGGTCAGCGATT
TTCTGGATATGTTCAGCCATCGCCTGACGCAGTTTGTCTGGCATATCTGGCGTAAGTACCGTTACCACGTCGCTTTCCGT
AACGGCGGCGTGGATGCGTTCTCGCAGCGGATGTACTCCCTGGTGGGGCTGGGCCACCGGCAGCTTCGCGACAGTCTGCC
CGTTAACCACAGCAAAATGCTGGCCTATGCCGGGATACTGGCAAATCCGGGACGTTCGCCGGAGATCGTCTGTACGCTGG
TTGCGCACTGTTTCGATTTAAATTTATCGGACGTGACGCTGCAAAACTGGCAGCGGCGGATGGTGGATATCGAGCCGGAT
CAGCAGAACAGTCTTGGATGTTACACGATTAAAAATGGCGAAAAACTGGCCGGGCGATCGGTGCTGGGTAATTTTGTCCT
CGGTACGCGGGTTCCCGATCTCAGCGGTAAATTTCAGTTAAGTATTAACCACCTGAGCCGCAAGCAGTTTCTCTCGTTCC
TGCCGTCAGGAGAAAATTTTCTGCCGCTGGCGATGTTTGTCTCCTTCGTCCTGCGCGATCAGCTTGCCTGGGATTTACAC
CTGGGGCTGGCCCCGGATCAGGTGGGGATTATGCGGCTGGGCGATAACAAGAGCGCGCTGCTGGGCTGGACGTCATTTCT
CGGCGAGCCGGGAGAGCATCCCTCAGTCACCATCAGGGTCAGGGAGTAA

Protein sequence : 
MGGKNRATPAHLSPDDAPAQDEQRTLREPLFQDACACNFFALSELLHRLASEGGETPVLSLDTPPAQETIRFQADASLGF
PVSDVSALEQDASGLFRMTTTFMGLQGSQSPLPGYYLDHLAWKSAHEQSPVSDFLDMFSHRLTQFVWHIWRKYRYHVAFR
NGGVDAFSQRMYSLVGLGHRQLRDSLPVNHSKMLAYAGILANPGRSPEIVCTLVAHCFDLNLSDVTLQNWQRRMVDIEPD
QQNSLGCYTIKNGEKLAGRSVLGNFVLGTRVPDLSGKFQLSINHLSRKQFLSFLPSGENFLPLAMFVSFVLRDQLAWDLH
LGLAPDQVGIMRLGDNKSALLGWTSFLGEPGEHPSVTIRVRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec22 YP_851423.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-93 55
aec22 AAQ96716.1 Aec22 Not tested AGI-1 Protein 1e-93 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeD_A1226 YP_002215078.1 hypothetical protein VFG2079 Protein 4e-61 41