Gene Information

Name : hpaD (SeD_A1178)
Accession : YP_002215034.1
Strain : Salmonella enterica CT_02021853
Genome accession: NC_011205
Putative virulence/resistance : Unknown
Product : 3,4-dihydroxyphenylacetate 2,3-dioxygenase
Function : -
COG functional category : S : Function unknown
COG ID : COG3384
EC number : 1.13.11.15
Position : 1169473 - 1170324 bp
Length : 852 bp
Strand : +
Note : identified by match to protein family HMM PF02900; match to protein family HMM TIGR02298

DNA sequence :
ATGGGCAAGTTAGCGTTAGCAGCAAAAATTACCCACGTGCCGTCGATGTATCTTTCTGAACTGCCAGGAAAAAATCACGG
TTGTCGTCAGGCAGCCATTGATGGGCATATTGAAATTGGCAAGCGTTGCCGCGAAATGGGCGTTGACACCATTATCGTAT
TCGACACCCACTGGCTGGTGAATAGCGCTTACCACATTAATTGTGCCGACCATTTCCAGGGCGTCTATACCAGCAACGAA
TTGCCGCACTTTATTCGCGACATGACCTATGACTATGACGGTAATCCGGAGCTCGGCCACCTGATCGCCGACGAGGCAGT
CAAACTGGGCGTGCGCGCTAAAGCGCATAACATCCCGAGCCTGAAGCTGGAGTATGGCACGCTGGTGCCGATGCGCTACA
TGAACAGCGACAAGCACTTCAAAGTGGTCTCCATCTCGGCGTTCTGCACTGTGCATGATTTTGCCGACAGTCGCAGACTG
GGCGAAGCCATTCTCAAGGCGATTGAGAAATATGACGGTACCGTAGCGGTATTCGCCAGTGGTTCTCTGTCGCACCGTTT
TATTGACGACCAACGGGCGGAAGAGGGGATGAACAGCTACACCCGCGAGTTCGATCATCAAATGGACGAGCGCGTGGTCA
AGCTGTGGCGCGAAGGCAAATTCAAGGAGTTTTGCACCATGTTGCCGGAGTACGCCGACTACTGCTACGGCGAAGGCAAC
ATGCACGACACGGTCATGCTGCTGGGAATGCTGGGTTGGGACAAATACGACGGCAAGGTGGAGTTCATCACCGACCTGTT
CGCCAGCTCCGGTACCGGCCAGGTAAACGCTGTTTTCCCGCTGCCTGCGTAA

Protein sequence :
MGKLALAAKITHVPSMYLSELPGKNHGCRQAAIDGHIEIGKRCREMGVDTIIVFDTHWLVNSAYHINCADHFQGVYTSNE
LPHFIRDMTYDYDGNPELGHLIADEAVKLGVRAKAHNIPSLKLEYGTLVPMRYMNSDKHFKVVSISAFCTVHDFADSRRL
GEAILKAIEKYDGTVAVFASGSLSHRFIDDQRAEEGMNSYTREFDHQMDERVVKLWREGKFKEFCTMLPEYADYCYGEGN
MHDTVMLLGMLGWDKYDGKVEFITDLFASSGTGQVNAVFPLPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaD AAO17180.1 HpaD Not tested tcd island Protein 6e-126 90