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Name : SeD_B0102 (SeD_B0102) Accession : YP_002213932.1 Strain : Genome accession: NC_011204 Putative virulence/resistance : Resistance Product : pilx4 protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 60342 - 62972 bp Length : 2631 bp Strand : - Note : identified by match to protein family HMM PF03135 DNA sequence : ATGTATGCCCTTATTCTTCCTGGCTGGTATGCCATCAGGCGTGTAACACAGTTTGATGAACGCTTTTTTGACCTTCTGTA TCTGAGAACTCTTGTCAAAGGGCATCCTTTATCAAACAAGCGATTCAGCGCAGTCCATTATGCGGGGAGCCAGTACGACG AAGTTGATATTTCAAAAGTGGATAACTTTATGAAGCTGAAAGACCAGTCTTCTGTTGAAGAGTTAATTCCGTACTCTTCA CATATCACTGATAATATTATCGTTACAAAAAACCGGGATTTGCTGGCAACCTGGCAGATAGACGGTGCTTACTTTGAGTG TGTTGATTCTGAAGATTTGTCAATTCTGACAGATCAGCTTAATACGCTTATACGTAGCTTTGAAGGGAAATCTGTTACGC TTTATCCTCATCGTATCAGGTGTAAAAAGGACGTCAGACCAGTATTTAACAGTAAAATTCCTTTTGTGAACAGAGTAATG AATGATTATTACGAGTCATTCCCTCAGTCTGAATTTTTCGAGAATAAATTATTTCTGACGATTTGTTTTAAACCTTTTAC TACGGAAGATAAAGTAACACATTTCTTTTCACGCAGTAAAAAACAAAAAGATATCTTTAAAGAGCCTGTTAATGAAATGA ATGAAATTTGCGACAGGTTGAATACCTATCTGTCCCGTTTTCATTCCCGACGTCTTGGGCTTTATGAAGATCATGGGGTT GTTTATTCAGATCAGTTATCTCTGTTCCAGTATCTACTTTCTGGTCGATGGCAAAAGGTCAGGGTTAGCAGTAGTCCGTT TTATACATATCTGGGAGGAAAAGACCTGTTCTTTGGTAATGATGCCGGACAAATTACCGCGTCAGACCATGCCCGGTATT TTCGTTGCATAGAGATTAAGGATTATTTTCAGGAGACGGATGCCGGTATTCTGGATGCTCTGATGTATCTCCCCGTTGAG TATGTCGTGACATCGTCCTTTACTGCGATGGATAAGCAGTCAGCGATTAAGGCGCTGGATGATCAGATCGATAAGCTGGA AATGACAGATGATGCTGCCAAATCTTTGCTGGCAGATCTGAAAGTCGGACTGGATATGGTTTCCAGTGGATATATTTCTT TCGGGAAATCGCATCAGACCCTGGTTGTCTTTGCGGATTCACCGGAGCGTCTGGTGAAAGACACCAATATCGTGACTTCC ACTCTGGAAGATTTGGGGCTGATTGTCACTTATTCAACACTGAGTCTTGGCGCAGCTTATTTTGCTCAGCTACCAGGAAA TTATACGCTTCGCCCTCGTCTGAGTACCCTCAGTAGTCTTAATTTTGCCGAAATGGAAAGTTTTCATAATTTCTTTTCAG GAAAAGAAAAAGGAAATACCTGGGGGGAAAAACTGATTACTCTTCGGGGGTCAGGTAATGATATCTACCATCTGAATTAC CATATGACGACTGAACATCAGAATTTCTTCGGTAAGAACCCGACGCTGGGGAATACCGAAATTCTCGGTACGTCTAACGT GGGTAAAACCGTATTACTGATGACAAAAGCATTTGCCGCCCAGCAGTTCGGTACGCCGGAATCATTCCCTGCAAACAGAA AACTGAAAAAACTGACCACGGTTTTTTTCGATAAAGACCGGGCAGGTGAAGTCGGTATACGGGCAATGGGGGGATCTTAT TACCGGGTGAAGGAGGGAGAGCCGACAGGCTGGAATCCCGCCGCACTGCCGCCAACAAAACGTAATATCGCTTTTATGAA GGACCTGGTGAGGCTGCTTTGTACTCTCAACAGTGAGCCGCTCGATGATTACCAGAACAGCCTGATTTCAGATGCGGTTG AACGTCTTATGCAACGGTCAGATCGCTCTTATCCTATCAGTAAACTACGGCCTCTTATCCAGGAGCCGGATGATACTGAA ACCAAACGTCATGGACTTAAAGCCCGTCTTAAGCCGTGGACGCAGGGGGAAGAGTTTGGCTGGGTGTTCGACAATCGGGA AGACACGTTTGATGTCGATAACCTGGATGTTTTCGGTATTGATGGAACGGAGTTCCTGGATAATAAGGTGCTGGCCAGTG CTGCTTCATTCTATCTCATCTATCGGGTCACCATGTTGGCCGATGGTCGCAGGCTTCTTATCTACATGGATGAGTTCTGG CAATGGATCAATAACGAAGCGTTCAGGGACTTTGTTTACAACAAGCTGAAAACCGGACGTAAACTCGATATGGTGCTTGT CGTAGCCACACAGTCACCGGATGAACTGATTAAATCACCCATTGCGGCAGCGGTTCGTGAGCAATGCGCCACTCATATCT ATCTGGCAAACCCGAAAGCCAAACGTAGTGAATATGTTGATGGTTTGCAGGTCAGGGAGCTTTATTTTGACAAAATTAAA GCTATTGATCCGCTGTCCCGCCAGTTCCTGGTTGTTAAGAACCCACAGAGGAAAGGTGAAAGTGATGATTTTGCTGCTTT TGCCAGACTGGAGCTGGGAAAAGCAGCGTATTACTTACCGGTTCTCAGTGCATCAAAACCCCAGTTAGAACTGTTCGATG AAATCTGGAAAGAAGGAATGAAGCCGGAAGAGTGGCTTGATACCTATCTGGAACAGGCGAACCTTATTTGA Protein sequence : MYALILPGWYAIRRVTQFDERFFDLLYLRTLVKGHPLSNKRFSAVHYAGSQYDEVDISKVDNFMKLKDQSSVEELIPYSS HITDNIIVTKNRDLLATWQIDGAYFECVDSEDLSILTDQLNTLIRSFEGKSVTLYPHRIRCKKDVRPVFNSKIPFVNRVM NDYYESFPQSEFFENKLFLTICFKPFTTEDKVTHFFSRSKKQKDIFKEPVNEMNEICDRLNTYLSRFHSRRLGLYEDHGV VYSDQLSLFQYLLSGRWQKVRVSSSPFYTYLGGKDLFFGNDAGQITASDHARYFRCIEIKDYFQETDAGILDALMYLPVE YVVTSSFTAMDKQSAIKALDDQIDKLEMTDDAAKSLLADLKVGLDMVSSGYISFGKSHQTLVVFADSPERLVKDTNIVTS TLEDLGLIVTYSTLSLGAAYFAQLPGNYTLRPRLSTLSSLNFAEMESFHNFFSGKEKGNTWGEKLITLRGSGNDIYHLNY HMTTEHQNFFGKNPTLGNTEILGTSNVGKTVLLMTKAFAAQQFGTPESFPANRKLKKLTTVFFDKDRAGEVGIRAMGGSY YRVKEGEPTGWNPAALPPTKRNIAFMKDLVRLLCTLNSEPLDDYQNSLISDAVERLMQRSDRSYPISKLRPLIQEPDDTE TKRHGLKARLKPWTQGEEFGWVFDNREDTFDVDNLDVFGIDGTEFLDNKVLASAASFYLIYRVTMLADGRRLLIYMDEFW QWINNEAFRDFVYNKLKTGRKLDMVLVVATQSPDELIKSPIAAAVREQCATHIYLANPKAKRSEYVDGLQVRELYFDKIK AIDPLSRQFLVVKNPQRKGESDDFAAFARLELGKAAYYLPVLSASKPQLELFDEIWKEGMKPEEWLDTYLEQANLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAP70302.1 | Pilx3-4/VirB3-4-like protein | Not tested | HPI | Protein | 9e-178 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeD_B0102 | YP_002213932.1 | pilx4 protein | BAC0398 | Protein | 3e-180 | 44 |
