Gene Information

Name : SeD_B0059 (SeD_B0059)
Accession : -
Strain :
Genome accession: NC_011204
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 33405 - 33769 bp
Length : 365 bp
Strand : +
Note : IS66 family element; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01527

DNA sequence :
GTGTCAGATATGCAGAAAAATGTGACTCCCGGCAGGCGTAAGGGCTGCCCTAATTATTCTCCTGAGTTTAAGCAGCAGCT
TGTTGCGGCCTCCTGCGAACCCGGCTTATCCATCTCAAAACTGGCGCTTGAAAACGGCATTAACGCCAATCTGTTGTTTA
AATGGCGCAAGGGAAAGCTGCTATTACCTTTCAGCTACTCCCTGTGACTCTCAATGCCACCTCCGTACAGCCAGAACTAA
CCGCTGAAGGCCCGGAGGTTCTCAGTATCAGCTGTGAGGCAACGTTCTGGCACGGGACGCTTCGCCTCAACGGCACTGTC
AGCGAAAAGCTCCTGACTCTGCTGATACAGGAACTGAAGCGATGA

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 DNA 1e-71 88.7
unnamed AAL99257.1 unknown Not tested LEE DNA 1e-71 88.5
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE DNA 1e-71 88.5
Z5096 NP_290247.1 prophage-associated protein Not tested LEE DNA 1e-71 88.5
ECs4545 NP_312572.1 hypothetical protein Not tested LEE DNA 1e-71 88.5
unnamed AAC31492.1 L0013 Not tested LEE DNA 1e-71 88.5
unnamed AAL08462.1 unknown Not tested SRL DNA 1e-71 88.5
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 DNA 6e-71 87.9