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Name : SeD_B0011 (SeD_B0011) Accession : YP_002213859.1 Strain : Genome accession: NC_011204 Putative virulence/resistance : Virulence Product : RlgA Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 6255 - 6815 bp Length : 561 bp Strand : + Note : identified by match to protein family HMM PF00239; match to protein family HMM PF02796 DNA sequence : ATGGCACTTTACGGCTATGCCCGCGTTTCAACCAGCGATCAGGATCTTACTCTGCAGACACAAATTCTCCGCGCTGCTGG TTGTGAAATTATTCGTGCAGAAAAAGCCAGCGGAAGCGGCCGGACCGGAAGGAGCGAGTTGCAGCTGCTGCTGGAGTTCC TGCGCCCTGGTGATACGTTGATGGTGACACGCGTGGATCGCCTGGCCCGCAGCATTAAGGACCTGCAGGACATTGTGTAT GCCCTGAATCAACAGGGCGTAACGCTCAGGGCAACAGAACAGCCAGTGGACACGCGTTCAGCTGCAGGCAAAGCCTTCCT CGATATGCTGGGTGTTTTCGCTGAGTTTGAAACCAATCTGAGACGTGAACGCCAGATGGAAGGCATTGCCGCGGCGAAAG CCAGGGGCGTATACCGGGGAAGGAAACCGTCCATAGATCCTGCTGAGGTATATCGTCTGTATACCATTGAGAAGATGGGA GCCACAGCCATCGCCCGCCAGCTCGGGATTGGGAGGGCGTCAGTCTACCGGGCGCTGGAAAATTATGAGCAGCCGGCGTA G Protein sequence : MALYGYARVSTSDQDLTLQTQILRAAGCEIIRAEKASGSGRTGRSELQLLLEFLRPGDTLMVTRVDRLARSIKDLQDIVY ALNQQGVTLRATEQPVDTRSAAGKAFLDMLGVFAEFETNLRRERQMEGIAAAKARGVYRGRKPSIDPAEVYRLYTIEKMG ATAIARQLGIGRASVYRALENYEQPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| res | AGF34985.1 | resolvase | Not tested | SGI1 | Protein | 3e-25 | 44 |
| res | AGF35025.1 | resolvase | Not tested | SGI1 | Protein | 3e-25 | 44 |
| res | AGF35059.1 | resolvase | Not tested | SGI1 | Protein | 3e-25 | 44 |
| res | AGK06929.1 | resolvase | Not tested | SGI1 | Protein | 3e-25 | 44 |
| res | AGK06966.1 | resolvase | Not tested | SGI1 | Protein | 3e-25 | 44 |
| res | AGK07012.1 | resolvase | Not tested | SGI1 | Protein | 3e-25 | 44 |
| res | AGK07070.1 | resolvase | Not tested | SGI1 | Protein | 3e-25 | 44 |
| res | AAK02044.1 | resolvase | Not tested | SGI1 | Protein | 3e-25 | 44 |
| tnpR | ACD85600.1 | TnpR resolvase | Not tested | SGI2 | Protein | 3e-25 | 44 |
| res | YP_005124341.1 | DNA-invertase | Not tested | Not named | Protein | 2e-14 | 43 |
| tnpR | ACF06154.1 | resolvase | Not tested | Tn5036-like | Protein | 5e-21 | 42 |
| tnpR | YP_006098373.1 | transposon Tn21 resolvase | Not tested | Tn2411 | Protein | 1e-19 | 41 |
| CDBH8_0918 | YP_005160010.1 | transposase-like protein | Not tested | Not named | Protein | 6e-21 | 41 |
| tnpR | AAL08439.1 | resolvase TnpR | Not tested | SRL | Protein | 9e-20 | 41 |
| tnpR | AFV53121.1 | Tn21 resolvase | Not tested | AbGRI2-1 | Protein | 9e-20 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeD_B0011 | YP_002213859.1 | RlgA | VFG1030 | Protein | 4e-20 | 41 |
