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Name : VFMJ11_A0428 (VFMJ11_A0428) Accession : YP_002157983.1 Strain : Genome accession: NC_011186 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis protein Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 488816 - 490681 bp Length : 1866 bp Strand : + Note : identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; match to protein family HMM PF05581 DNA sequence : ATGAAGTTTCGACACAAAATTATTTTAGCTTTTTCAATTATTATGACAGTGACTTTGGCTCTATTAAGTACTGTTCAATA CCTTAATATGAAAAAAGAAGTAGAGCATGAAGTTCAATCAAGTATTCATGAGATTGTTGATGGTGTACGCACAACGGTGA ATTCAGAACTAGCGGGAAAAACGTTATTAGCCGAATACGTAACAGAAATTGCTCAAAGAGATTTGAACTCAAAAACGCTT GAGACAATCTTAAGCCAACCTCAAGTAAAAAAAGCGTTTGTACTTGCAGGCATCGGTTTTGAAGATGGACATGATTTTGT TAGTAATGATCCAACGTGGGATCCTCAAGGATATGATGCAAGAACTCGTGGTTGGTATATATCCGCAAAACAAAAAAATG GCACAATAATTACTGAACCTTACGAAGATGCCCTTACTGGAGAAATTCTGATTTCAATTGCAACGGCAGTAAAGTCAGAT AATCAGTTTATTGGATCTATTTTTTTCGATTTGAGCTTAGGAAGTTTAGCTGAGTTAGTGAATCAAGTTGAACTATTTGA TGCTGGATACTTATTTATTGTTGATAAGACTGGAACCGTTATCGCTCATCCTGATAGCCAATACAATGGTCAATCTATGG CGTCATTCCTACCAAATATTCAATTAAACTCAAACTTACAAACAATAGAGATCAACGGGGCGACACACGATGTCTCATTT ACCTCTATTGATGGCTATCCTTGGTCAATTGGTGTTGTTCTTGATGAAGGTAAAGTGTTTAAACAAATCAATGAATTAAA AAATGATTCATTAATATATTCAGTTGTTGCGATTATTGTTTCAATTGTTTTGATGCTGATGTTTATTACTCGTCTTATCC GTCCTGTTCAAACATTAAATTCTGCAATTCAGAACGTAGCATCAGGAGAAGCGGATTTAACACAGCGACTTGATACCAAA ATTGATCCTGAATTCGCACCTCTAGCGGAAGGCTTTAATCAGTTTATTATTAATCTTCAAACTCAAGTAACAGAAACCAA AGCGTTAAGTCACCAATTAAATCAAGGGGCTCAGAAGATCTTAGTTGGTGCAAATGACTCAGAAACTGCAATGAATACGC AAATGATGGAGTTAGAGCAACTGGCAACGGCCATGAATGAGATGGCTGCTACGTCGATTGATGTGGCAGGAAACGTACAA AGTGCCGCTGAATATGCCAAAAAAGCGGACAGTGCAACCGAGCATGGTATGACGGTTGTAAATCAAACATCAGAAGAAAT TACTGATCTATCAACGAACATTAATCAAGCTGTAGAAGAAGTTGGAAAACTAGAAAAAGCGACGGACAGCATTGGTACAA TTTTACGTGTTATTAATGATATTGCAGAGCAAACAAACTTACTTGCTCTTAATGCGGCAATAGAATCAGCAAGAGCAGGA GAGGCCGGCCGCGGGTTTGCTGTTGTTGCTGATGAAGTAAGAACCCTCGCTAAGCGTACGCAAGAATCGACAACAGAAAT CGCAACAATGATTGAACAATTACAATCAGGTGCAGCAAGTGTTTCTTCTTCAATGTTAAGCAGCCAGCAAAGAGCGGACT CTACCGTTGATAAAGCCAAGCAAACCGCTGAAGCATTAACTCAGATAAGAGAAACAATTCAACAAATTAATGATATGAAT ATTCATATAGCTTCTGCTGCTGAAGAGCAAAGCCATGTTGCTGAAGAAATAAATGGAAAGACTGTGAATATTAAAGATTT ATCAGTATTGGTTCATGAGGCGGCACAAGGTGCTGCGGTTTCTATTAATGAACAGGTGAGTGTGGTTGAAAGCCAAGAAA GGATAATGAATAAGTTTACAGTGTAA Protein sequence : MKFRHKIILAFSIIMTVTLALLSTVQYLNMKKEVEHEVQSSIHEIVDGVRTTVNSELAGKTLLAEYVTEIAQRDLNSKTL ETILSQPQVKKAFVLAGIGFEDGHDFVSNDPTWDPQGYDARTRGWYISAKQKNGTIITEPYEDALTGEILISIATAVKSD NQFIGSIFFDLSLGSLAELVNQVELFDAGYLFIVDKTGTVIAHPDSQYNGQSMASFLPNIQLNSNLQTIEINGATHDVSF TSIDGYPWSIGVVLDEGKVFKQINELKNDSLIYSVVAIIVSIVLMLMFITRLIRPVQTLNSAIQNVASGEADLTQRLDTK IDPEFAPLAEGFNQFIINLQTQVTETKALSHQLNQGAQKILVGANDSETAMNTQMMELEQLATAMNEMAATSIDVAGNVQ SAAEYAKKADSATEHGMTVVNQTSEEITDLSTNINQAVEEVGKLEKATDSIGTILRVINDIAEQTNLLALNAAIESARAG EAGRGFAVVADEVRTLAKRTQESTTEIATMIEQLQSGAASVSSSMLSSQQRADSTVDKAKQTAEALTQIRETIQQINDMN IHIASAAEEQSHVAEEINGKTVNIKDLSVLVHEAAQGAAVSINEQVSVVESQERIMNKFTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0514 | NP_230165.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 5e-98 | 44 |
