Gene Information

Name : VFMJ11_A0199 (VFMJ11_A0199)
Accession : YP_002157756.1
Strain :
Genome accession: NC_011186
Putative virulence/resistance : Virulence
Product : siderophore biosynthesis IucC protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4264
EC number : -
Position : 227688 - 229448 bp
Length : 1761 bp
Strand : +
Note : identified by match to protein family HMM PF04183

DNA sequence : 
ATGGAGCAAATTGCGTTACATACTCACTGGCCAGCGGCAAACCGTAAAATGGTGGCTAAATTAATCAGTGAGTTAGCTTA
TGAACAAGCGTTTAAAATAGAGCAAAATAACCAAGGCTATGTATTGAGGCTGGATGATGGTGTTTGTTACCAATTCTTAG
GTAAAACTAATATTTGGGGGCAAATAGTTATCGAACCGACTTCGTTAATTCGTAAACAGAAAAGTCTGAATTCTGATGTA
TTAGCAACGCAATTTATGATGGATGTTCAGCGTGTTATTAACATTGGTGATGAATCGTTAGCTGAACATTTTGAAGATTT
AAATGCCACCTTGTTAGGTGATTGCAAGCTTGCACAGCGTAAAATGAATATCTCTGCAAATGAGCTGGCTTTTTTATCAT
GTGAACAACAGCAGCTTCTGTTTAATGGTCATCCTAAGTTTGCTTTTAATAAGGGACGTAGAGGGTGGGGAACACAAGAT
CTTTCATTATACGCCCCAGAGGCTGAGCGAGCATTTCAGTTAGCTTGGGTTGCGGTACATGAATCCATTTTAGAGAAAGC
GACCAATAGCAAAGTGGACTGGAAATGCTTGGTACTTTCTGCGGTGAGTAATGCTGAATTTCATGTTATGAATTCACAGC
TTTCGTCATTTAATGTTGATAGTAGCGAATATACTTTTGTACCTGTGCACCCTTGGCAGTGGGAGCAAAAATTATCAATT
CTATTTTCTAGAGAAATGGCTGAGAAAACGTTGGTTTACTTGGGGAAATTTGGAGATGAATTTTTACCGCAATTATCAAT
TAGAACGTTGAGTAATGTAACGCGTCCAGAGAGCTATGATATTAAACTGCCTTTAACAATCATGAATACTTCTTGTTATC
GTGGTATTCCGGGTCGTTATATTCTTGCGGGGCCAATAGCATCCGATTGGTTGGATTCTATTTTTAAATCGGATCCTTTA
TTCGTTGATAAAAAAGCCGAAGTGTTACAAGAGCCAGCAGCAGGGTTCGTTGCTCAGGCTGACTATAAGCTATTGACAGA
TGCCCCTTATCGTTATCATGAATTGCTTGGTGTGATATGGAGAGAATCAGCGCAATCTAAACTTGGTGAAAATGAGAGTG
CGATATTAATGGCCGCACTGATGGAGTCTGATGAATCTGGTGTGCCTCTGATTTCTGAGTATATTCAAGCCTCTGGATTA
TCAATAGAAGCATGGTTAGATAAGCTGTTTGATGCCGTTGTGATCCCTTTTTATCACTTACTCTGTAAATATGGTGTATC
CCTCATTGCGCACGGGCAAAACGTAACGTTAGTTATGGAAGGTGGGATACCAAAGCGCATTTTATTGAAGGATTTTCAGG
GAGATATGCGCCTTGTTGAGCGAGATATTCCAGAGCAAGAAACCCTTGCTCCTTTAGTTAAAGAAGTGACAGTTAAATTA
CCTGAAGAGTTAATTATTCATGATTTGCAAACAGGTCATTTCGTTACGGTTCTTCGCTTTATCTCGCCACTTGTCGAAAC
TTTAGGGTTGCCTGAAATCGAGTTTTATAAGGTACTTGCTCAACGAGTTCACACTTATATGGCTATGACTCCTGAATATA
AAGACAGATTTGAACGTTTAGATCTGTTTAAACCCAGAATATTACGTATAGGGCTTAATTTAGCTAAGTTTCGACATAGT
ACGGATTCGAGTGCTTCTCGTATGCTTCCAGATATGGACGATAAGGTAGATAACCCACTGTACATCGCTTTAAATCAATA
A

Protein sequence : 
MEQIALHTHWPAANRKMVAKLISELAYEQAFKIEQNNQGYVLRLDDGVCYQFLGKTNIWGQIVIEPTSLIRKQKSLNSDV
LATQFMMDVQRVINIGDESLAEHFEDLNATLLGDCKLAQRKMNISANELAFLSCEQQQLLFNGHPKFAFNKGRRGWGTQD
LSLYAPEAERAFQLAWVAVHESILEKATNSKVDWKCLVLSAVSNAEFHVMNSQLSSFNVDSSEYTFVPVHPWQWEQKLSI
LFSREMAEKTLVYLGKFGDEFLPQLSIRTLSNVTRPESYDIKLPLTIMNTSCYRGIPGRYILAGPIASDWLDSIFKSDPL
FVDKKAEVLQEPAAGFVAQADYKLLTDAPYRYHELLGVIWRESAQSKLGENESAILMAALMESDESGVPLISEYIQASGL
SIEAWLDKLFDAVVIPFYHLLCKYGVSLIAHGQNVTLVMEGGIPKRILLKDFQGDMRLVERDIPEQETLAPLVKEVTVKL
PEELIIHDLQTGHFVTVLRFISPLVETLGLPEIEFYKVLAQRVHTYMAMTPEYKDRFERLDLFKPRILRIGLNLAKFRHS
TDSSASRMLPDMDDKVDNPLYIALNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucC YP_002414044.1 Aerobactin siderophore biosynthesis protein Virulence Not named Protein 1e-133 47
iucC NP_839221.1 siderophore biosynthesis protein Virulence SHI-2 Protein 9e-133 47
iucC NP_709456.1 siderophore biosynthesis protein Virulence SHI-2 Protein 9e-133 47
iucC AAD44748.1 IucC Virulence SHI-2 Protein 3e-132 46
iucC AAK71633.1 IucC Virulence SHI-3 Protein 2e-132 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VFMJ11_A0199 YP_002157756.1 siderophore biosynthesis IucC protein VFG0938 Protein 4e-134 47
VFMJ11_A0199 YP_002157756.1 siderophore biosynthesis IucC protein VFG0617 Protein 4e-133 47
VFMJ11_A0199 YP_002157756.1 siderophore biosynthesis IucC protein VFG1083 Protein 1e-132 46