Gene Information

Name : VFMJ11_A0194 (VFMJ11_A0194)
Accession : YP_002157751.1
Strain :
Genome accession: NC_011186
Putative virulence/resistance : Virulence
Product : ferrichrome transport ATP-binding protein FhuC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 221274 - 221912 bp
Length : 639 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAAATTACTTAGTCGTCAAAATGCACCGTCATCAGGTCATGTGCTATTTGATGACAAATCAATTAACCAACTTTCACA
GCAAGATTTTGCATTGCAGGTTGCTTATTTACCTCAACACCCTCCGGTTACTGATGGTGTGACGGTTCGTGAATTGGTTT
ATTTTGGACGTTATCCATGGAAAGGAGCATTTGGACGCTATAGTAAAAAAGACAATCAATTGGTCGATGAGGCAATTGAA
AAGGTGGGGTTGACGCTATTTCGAGATCGTTTTGTCGCGACATTATCTGGTGGTGAGAGGCAGAGGGCTTGGGTTGCAAT
GTTATTGGCTCAACAAAGTCAGTGTATTTTATTGGATGAACCCACATCAGCATTAGATATTGCGCATCAATATGAATTAT
TGGCCTTGATAAGAGAGTTAAATCAAACCCTAAATCTAACCGTCATTATGGTATTACATGATATCAATATGGCTGCGAAA
TTTAGCGATCATTTGATTGCTCTGCATTCTGGATGTGTTATTGCGCAAGGATCGCCAGAGAGAGTGATGAATACTCAAAC
GTTAAAGCAAATTTACGGTATGGATTTAGCGTTATTTTCTCATCCTGATACAGGGAAAGTGATCAGTTACATCCCCTAA

Protein sequence : 
MKLLSRQNAPSSGHVLFDDKSINQLSQQDFALQVAYLPQHPPVTDGVTVRELVYFGRYPWKGAFGRYSKKDNQLVDEAIE
KVGLTLFRDRFVATLSGGERQRAWVAMLLAQQSQCILLDEPTSALDIAHQYELLALIRELNQTLNLTVIMVLHDINMAAK
FSDHLIALHSGCVIAQGSPERVMNTQTLKQIYGMDLALFSHPDTGKVISYIP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-33 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-38 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-39 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-39 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-39 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-39 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-36 41
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VFMJ11_A0194 YP_002157751.1 ferrichrome transport ATP-binding protein FhuC BAC0164 Protein 1e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VFMJ11_A0194 YP_002157751.1 ferrichrome transport ATP-binding protein FhuC VFG1042 Protein 1e-33 42
VFMJ11_A0194 YP_002157751.1 ferrichrome transport ATP-binding protein FhuC VFG0925 Protein 7e-37 42