Gene Information

Name : VFMJ11_A1239 (VFMJ11_A1239)
Accession : YP_002158784.1
Strain :
Genome accession: NC_011186
Putative virulence/resistance : Resistance
Product : arsenical pump-driving ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0003
EC number : 3.6.3.16
Position : 1372893 - 1374641 bp
Length : 1749 bp
Strand : -
Note : identified by match to protein family HMM PF02374; match to protein family HMM TIGR00345

DNA sequence :
ATGATGAATTATCTTGAGAATGTTCCACCTTACTTGTTTTTTACAGGTAAAGGAGGTGTTGGTAAAACATCTCACGCATG
TGCTTCGGCACTTGCGTTAGCTGAATCAGGGAAAAAAGTACTGATTGTAAGTACAGATCCAGCATCAAACGTCGGTCAAG
TATTTGATACTGAAATAGGTGAATATATTACAGCAATCAATCACGTCGAGAATTTATTTGGTATGGAGATTGACCCGCAA
GCTGCTGCCCAAAATTACCGTGAACGTATTGTTGGACCTATTCGAGGTAAGCTTCCAGATCTAATCGTAAAAAACATCGA
AGAACAACTGTCTGGAGCGTGTACCACGGAAGTTGCCGCGTTTGATGAGTTCACAAGTCTATTAACTGACGAGTCTCTGC
AAAGTGATTTTGATCATATTGTGTTTGATACGGCACCAACAGGTCATACGATTCGGCTGTTGCAATTACCAGGAGCATGG
AATGAATTCCTAGAACATGGTCAGGGCGATGCTTCCTGTTTAGGTCCTTTAGCGGGTCTTGAAAAGCAACGAGTGAAATA
TGCCAATGCGATTGCAGTATTATCTGATGAGAGCAAAACACGCTTAATTCTTGTTGCTCGAGCACAATCAGCAACTATCA
AAGAAGCGGCTAAAACGCATATTGAACTTTCGGATTTGGGCCTAAAAGGACAACATCTGGTATTAAATGGGTTATTCCCT
GTGGCAGAAAGCAGTGGTGATGAACTAGCATTGGCAATTATTGAGCGTGAACAAAAGATAATTGAGGATCTGCCACGGTC
ATTAGCAAAACTGCCCCTAACTCAAGTACCACTTTTATCGAGCAATGTCGTTGGTTTAGATAGCTTACGGGTACTACTTG
AAGCACAACCTATAGTGACGCGCTCAGTCAATTCAACCGCCATCAATGTCGATAAGTATGATTCTTTATCGGTGATGATT
GATGAACTTGCGAAGCAGAAACATGGTTTAATCATGCTCATGGGTAAAGGTGGAGTAGGTAAAACTACGATGGCGGCGGC
AATTGCAAGTAAATTAGCAGAACAAGGTCTTGATGTTCACTTAACCACTTCAGATCCAGCAGCTCATTTACAATTCACAT
TGAACAGTGAAGACACAAAATTTACAGTGAGCAAAATTGATCCTGCAGCAGAGACTACCCGTTATCGAGAAGCTATTCTA
AAAGAGAAAGGAGCATCATTAGATGAAGATGGTCGTAAATTGCTTGAAGAAGATCTACGTTCGCCGTGTACTGAAGAGAT
AGCTGTATTTCAAGCATTTTCTGAAGTCATTAAGCAAGCAGATAAAAAGTTCGTAATTATGGATACTGCGCCAACTGGTC
ATACTTTGTTATTGCTTGATGCTACGGGTGCATATCATAAAGAGATGACACGTCAGAATCAAAATGTAGCAACCCCTTTA
GTAATGCTGCAAAACTCAGATGTGACCAAAGTGATCATCACGACGCTAGCGGAGCCTACGCCGGTACAAGAGGCATACGC
TCTTCAACAAGATCTTCAACGTGCGAACATTAATCCTTGGGGGTGGATCATCAATAATTCATTGGTACAAAGTGATATTA
ATGCACCTCTTTTAAAAGAACGAGCAGCAAGTCAGCAACCATTGATTGATAAAGTGATTAATGAATATAGTTCTCGAACT
GCTGTGGTTGCGTTACAGAAAAAAGAACCAGTAGGCGTTTTAGCTCTGAATGCACTTTCTGACAGTTAA

Protein sequence :
MMNYLENVPPYLFFTGKGGVGKTSHACASALALAESGKKVLIVSTDPASNVGQVFDTEIGEYITAINHVENLFGMEIDPQ
AAAQNYRERIVGPIRGKLPDLIVKNIEEQLSGACTTEVAAFDEFTSLLTDESLQSDFDHIVFDTAPTGHTIRLLQLPGAW
NEFLEHGQGDASCLGPLAGLEKQRVKYANAIAVLSDESKTRLILVARAQSATIKEAAKTHIELSDLGLKGQHLVLNGLFP
VAESSGDELALAIIEREQKIIEDLPRSLAKLPLTQVPLLSSNVVGLDSLRVLLEAQPIVTRSVNSTAINVDKYDSLSVMI
DELAKQKHGLIMLMGKGGVGKTTMAAAIASKLAEQGLDVHLTTSDPAAHLQFTLNSEDTKFTVSKIDPAAETTRYREAIL
KEKGASLDEDGRKLLEEDLRSPCTEEIAVFQAFSEVIKQADKKFVIMDTAPTGHTLLLLDATGAYHKEMTRQNQNVATPL
VMLQNSDVTKVIITTLAEPTPVQEAYALQQDLQRANINPWGWIINNSLVQSDINAPLLKERAASQQPLIDKVINEYSSRT
AVVALQKKEPVGVLALNALSDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsA2 YP_001007632.1 arsenical pump-driving ATPase Not tested YAPI Protein 1e-172 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VFMJ11_A1239 YP_002158784.1 arsenical pump-driving ATPase BAC0572 Protein 1e-172 60
VFMJ11_A1239 YP_002158784.1 arsenical pump-driving ATPase BAC0030 Protein 4e-169 60
VFMJ11_A1239 YP_002158784.1 arsenical pump-driving ATPase BAC0571 Protein 6e-168 59