Gene Information

Name : VFMJ11_0681 (VFMJ11_0681)
Accession : YP_002155424.1
Strain :
Genome accession: NC_011184
Putative virulence/resistance : Virulence
Product : N-acetylneuraminate lyase (NALase)
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0329
EC number : 4.1.3.3
Position : 716173 - 717066 bp
Length : 894 bp
Strand : -
Note : identified by match to protein family HMM PF00701

DNA sequence : 
ATGAAAAAGTTAACCGGTTTAATTGCTGCTCCACATACTCCATTTGATTCTTCAAACAACGTAAACTTTGAAGAGATTGA
TAAAATCGCCAAGCATTTAATCAAAGATGGCGTAAAAGGCATTTATGTATGTGGGACTACTGGAGAAGGCATTCACTGTA
GTGTTGAAGAACGTAAAGCCATTGCTGAACGTTGGGTAAGCGCTTCTAATAATCAATTAGATATCATTGTACATACAGGT
GCATTAAGCATTGTTGATACGCTAGAACTTACACGCCATGCAGATACACTAGATATTTTAGCTACATCTGCAATTGGTCC
ATGTTTCTTCAAACCAGGTAGCGTTGCTGATTTAGTTGAATATTGTGCAACCATTGCAGCAGCTGCTCCATCAAAAGGCT
TCTACTACTACCACTCTGGTATGTCTGGCGTGAATTTAAATATGGAAGAATTTTTAATCCAAGCTGATAAACGTATTCCT
AATTTATCTGGTCTTAAATTTAACAGCGGTGATTTGTACGAATACCAACGTTGCCTTCGAGCTTGCGATGGTAAATTTGA
TGTTCCATTTGGTGTTGATGAGCACCTACCTGGCGCACTTGCTGTTGGTGCAAAAAGTGCAGTAGGTAGTACTTATAACT
ACGCAGCTCCACACTTTAATTCAATTATCGAAGCGTTTAATCGTGGCGATCAAGAAGCGGTATTCAATAAGATGACAAAT
GTTATTGAGCTTATCCGTGTACTGGTTGATTTCGGCGGTGTGGCTGCTGGTAAAGTAGCAATGGAGCTTCACGACATCAA
TGCCGGTGATCCTCGCTTGCCTCTAATGCCGTTAACTGCAGAGCAGAAAGTAACCGTAGCAACTCGAATGAGAAACGCTG
GTTTCATGCAATAA

Protein sequence : 
MKKLTGLIAAPHTPFDSSNNVNFEEIDKIAKHLIKDGVKGIYVCGTTGEGIHCSVEERKAIAERWVSASNNQLDIIVHTG
ALSIVDTLELTRHADTLDILATSAIGPCFFKPGSVADLVEYCATIAAAAPSKGFYYYHSGMSGVNLNMEEFLIQADKRIP
NLSGLKFNSGDLYEYQRCLRACDGKFDVPFGVDEHLPGALAVGAKSAVGSTYNYAAPHFNSIIEAFNRGDQEAVFNKMTN
VIELIRVLVDFGGVAAGKVAMELHDINAGDPRLPLMPLTAEQKVTVATRMRNAGFMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1776 NP_231411.1 N-acetylneuraminate lyase Not tested VPI-2 Protein 3e-107 72
VC0395_A1374 YP_001217317.1 dihydrodipicolinate synthetase family protein Not tested VPI-2 Protein 3e-107 72
VPI2_0024c ACA01841.1 dihydrodipicolinate synthase/N-acetylneuraminate lyase Not tested VPI-2 Protein 2e-107 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VFMJ11_0681 YP_002155424.1 N-acetylneuraminate lyase (NALase) VFG1109 Protein 1e-107 72