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Name : gspE (VFMJ11_2596) Accession : YP_002157258.1 Strain : Genome accession: NC_011184 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2776397 - 2777896 bp Length : 1500 bp Strand : - Note : identified by match to protein family HMM PF00437; match to protein family HMM TIGR02533 DNA sequence : ATGGCGGATACATTATTTCCTGAATCTAACGCTGTACTTCGTTTGCCTTTTTCATTTGCAAAAAGGCATTCGGTAGTCAT TGAATCAAGTGTTAATGGGTGGGTGCTGTACTATGTATCGCCCCCTTCATCTATGGTGCTGTGTGAGATCCGCCGTGTTT GCCAATCTGGTTTTTCATTAATTCAGTTAACTAAAGATGAGTTCGATACTAAGTTAACTCAGGTATATCAACGTAATTCA TCAGAAGCTCAACAATTAATGGAAGATATCGGTGCAGACAGTGACGATTTCTTCTCATTAGCTGAAGAGTTACCAAATAA TGATGATTTATTAGAATCAGAAGATGATGCGCCGATCATTAAATTAATCAACGCCATGCTAGGTGAAGCGATTAAAGAGG GTGCATCGGATATTCATATTGAAACGTTTGAGAAAGTATTGTCGATTCGTTTCCGTGTCGATGGTGTACTGCGTGATGTA TTAAGCCCAAGCCGTAAGTTAGCGCCATTATTGGTGTCTCGTGTAAAAGTGATGTCGAAATTGGACATTGCTGAAAAACG AGTCCCACAAGATGGTCGTATTTCATTACGTATTGGTGGGCGTGCTGTTGATGTGCGTGTATCAACCATGCCGTCATCGC ATGGTGAGCGCGTGGTAATGCGTTTACTGGATAAGAATGCGACGCGACTGGATTTAAACAGTTTAGGCATGTCGGCTGAA AATCATAAAAACTTTCAGCATATTATTAAACGCCCACACGGTATTATTTTGGTTACTGGCCCAACTGGCTCGGGTAAATC AACCACCCTGTATGCGGGCTTAGGTGAATTAGACAGCTCTCAATCCAATATTTTAACCGTTGAAGACCCTATCGAATTTG ATATTGATGGCATTGGGCAAACACAAGTAAATCCAAAAGTAGACATGACGTTTGCCCGTGGTTTACGTGCCATTCTTCGT CAAGATCCTGATGTGGTGATGATAGGTGAGATCCGTGATTTAGAAACCGCAGAAATTGCCGTTCAAGCTTCATTAACCGG TCACTTGGTAATGTCTACACTGCACACCAATACAGCGGTAGGTGCGATTACTCGTCTTCGTGATATGGGCATTGAACCTT TCCTAATTTCATCTTCATTACTTGGGGTGCTTGCACAACGTCTGGTTCGAACTCTGTGCGGTGAATGTAAAGAAGCGTAT CAAGCTGATGAGGAGCAGAAGAAATTATTTTCTCTTTCAGCAAGTGACGAGTTAACTCTATATAAGCCCATAGGTTGTGA ACACTGTAATGGTAAAGGTTATCGTGGTCGTACGGGTATTCATGAACTTTTAGTGGTGAATGAAAAAGTACAAGAGTTGA TCCACAAAGAAGTGGGTGAACAAGCGATAGAAAAAGAAGTAAGAAAGTCGACTCGCAGTATTCAACAAGACGGCTTATTA AAAGTGCAAAAAGGAATAACCACATTAGAAGAGGTGATGCGAGTCACTCGGGAAGGATAG Protein sequence : MADTLFPESNAVLRLPFSFAKRHSVVIESSVNGWVLYYVSPPSSMVLCEIRRVCQSGFSLIQLTKDEFDTKLTQVYQRNS SEAQQLMEDIGADSDDFFSLAEELPNNDDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKVLSIRFRVDGVLRDV LSPSRKLAPLLVSRVKVMSKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLNSLGMSAE NHKNFQHIIKRPHGIILVTGPTGSGKSTTLYAGLGELDSSQSNILTVEDPIEFDIDGIGQTQVNPKVDMTFARGLRAILR QDPDVVMIGEIRDLETAEIAVQASLTGHLVMSTLHTNTAVGAITRLRDMGIEPFLISSSLLGVLAQRLVRTLCGECKEAY QADEEQKKLFSLSASDELTLYKPIGCEHCNGKGYRGRTGIHELLVVNEKVQELIHKEVGEQAIEKEVRKSTRSIQQDGLL KVQKGITTLEEVMRVTREG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-155 | 65 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-155 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_002157258.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-153 | 64 |
| gspE | YP_002157258.1 | general secretory pathway protein E | VFG0182 | Protein | 1e-142 | 62 |
| gspE | YP_002157258.1 | general secretory pathway protein E | VFG1876 | Protein | 2e-133 | 56 |
| gspE | YP_002157258.1 | general secretory pathway protein E | VFG0112 | Protein | 2e-92 | 45 |
| gspE | YP_002157258.1 | general secretory pathway protein E | VFG2426 | Protein | 1e-75 | 44 |
