Gene Information

Name : gspG (VFMJ11_2594)
Accession : YP_002157256.1
Strain :
Genome accession: NC_011184
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 2774667 - 2775119 bp
Length : 453 bp
Strand : -
Note : identified by match to protein family HMM PF07963; match to protein family HMM PF08334; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532

DNA sequence :
ATGCAAGTCAATTCAGCTCAACGTAAACAAGGCGGCTTTACACTGTTAGAAGTAATGGTCGTGATTGTAATTCTTGGTGT
GTTAGCGAGCTTAGTGGTTCCAAATCTACTTGGTAACAAAGAGAAAGCCGATCAGCAAAAAGCGATCACCGATATTGTTG
CACTAGAAAACTCACTGGATATGTACAAGTTAGATAACAGCGTATATCCAACAACAGATCAAGGTTTAGATGCGTTAGTT
TCAAAACCAACAGCAACTCCAGAGCCTCGTAATTACCGTGCAGACGGCTACATTCGTCGTTTACCAAATGATCCATGGGG
CAATGAGTACCAATACCTAAGCCCTGGTGATAACGGCACTATCGATATCTTCACATTAGGCGCAGATGGCCAAGAAGGCG
GTGAAGGTGCGAATGCGGATATTGGTAACTGGAACATGCAAGACTTTCAATAA

Protein sequence :
MQVNSAQRKQGGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADQQKAITDIVALENSLDMYKLDNSVYPTTDQGLDALV
SKPTATPEPRNYRADGYIRRLPNDPWGNEYQYLSPGDNGTIDIFTLGADGQEGGEGANADIGNWNMQDFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-53 73
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-53 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_002157256.1 general secretion pathway protein G VFG2050 Protein 8e-54 73
gspG YP_002157256.1 general secretion pathway protein G VFG0180 Protein 1e-40 58
gspG YP_002157256.1 general secretion pathway protein G VFG1871 Protein 3e-37 57