Gene Information

Name : gspI (VFMJ11_2592)
Accession : YP_002157254.1
Strain :
Genome accession: NC_011184
Putative virulence/resistance : Virulence
Product : general secretion pathway protein I
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 2773681 - 2774058 bp
Length : 378 bp
Strand : -
Note : identified by match to protein family HMM PF02501; match to protein family HMM PF07963; match to protein family HMM TIGR01707; match to protein family HMM TIGR02532

DNA sequence :
ATGAGGAATAAGAAACATCAGCGAACCTCTTCTAAAGGCATGACATTACTTGAAGTCTTAGTGGCGCTCGCTATTTTCGC
AACTGCAGCCCTAAGTGTGTTGCGTTCGGTGACTCAGCACATAAATACATTAAGTTATTTAGAAGAAAAAACCTTTGCAA
GCATTGTGGTGGATAATCAAATGGCATTAATGATGTTAGATAAACCACCGACAAAGAAGAAGAAAGGAGAGACAGAACTG
GCAGGACAAACATGGTATTGGACGATTGCTCCAGTAAAAACAACGTCTGATATTTTAAAGTCTGTGGATGTATCTGTGTC
GACCACAAAAGATCAAGAATCACCTTTAATTACGGTACGAACCTATGTTGCGCCGTAA

Protein sequence :
MRNKKHQRTSSKGMTLLEVLVALAIFATAALSVLRSVTQHINTLSYLEEKTFASIVVDNQMALMMLDKPPTKKKKGETEL
AGQTWYWTIAPVKTTSDILKSVDVSVSTTKDQESPLITVRTYVAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 1e-05 43
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-07 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspI YP_002157254.1 general secretion pathway protein I VFG2052 Protein 1e-07 43