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Name : pilB (VFMJ11_2299) Accession : YP_002156983.1 Strain : Genome accession: NC_011184 Putative virulence/resistance : Virulence Product : type IV-A pilus assembly ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2467342 - 2469030 bp Length : 1689 bp Strand : + Note : identified by match to protein family HMM PF00437; match to protein family HMM PF05157; match to protein family HMM TIGR02538 DNA sequence : ATGCACACCAACCTCGCCTCTATCTTGCGTCAAGCTGAGTTAATCAGTGCGACGCAAGAAAACAGTATCATAGAGTCAGT TCAAGCAGAAACGCACACCGTGCCTTCTGCTATTTTAGCTCAGGGGATATTTACTCCTGATGAACTCGTAAGTCACCTTG CTCAAATCTTTGGACTTGAGGTGATCAACGTGACTCAATTTGATTATGCCGCCACTTGTCAAAAGCTGGGACTGCGCGAT CTCATTACCCGTTATCAAGCCCTTCCAGTTAATCACGACAGTTGCACGATTCGTCTTGCTGTCGCTGATCCAAGTATTGC TCAAATAGAAGATGACTTTCGCTTTACCAGCGGAAAACAAATTGAATTAGTACTTGCGGATCAAGGACAAATCCAAGCCG CTATTCGACGAGTCTACGGTGCAGGATTGTCTGCAAATGACAATCAACATAAAGAGATAACCCAAGATGAGTTAGCCTCA CTGGTTGATGTTTCACTTGATGAGATAAGTGCCACAGAAGATCTCAGCCAAGACGATGCTCCCGTCACTCGCTTTATTAA CCAAATTTTATTAGAAGCGGTGCGTAAAGGAGTATCGGATATTCACTTTGAACCCTATGAAGATAATTATCGTGTGCGTT TTCGCTGCGATGGGATCTTAGTAGAAAACAGCCGTCCATCCGCTCACTTAAGCCGTCGTTTATCTGCTCGCCTTAAAATC ATGGCAAAATTAGATATTGCAGAACGTCGTCTACCACAAGATGGGCGTATTAAACTCAAATTAAACAGTACCACTTCGAT TGATATGCGTGTTTCTTCACTGCCAACCTTATGGGGTGAAAAAATCGTACTGCGTTTATTAGACAGCAGTGCTGCTAATT TAAATATTGATAAACTAGGCTACAGCGATCAACAAAAAGCCCTATATTTAGAAGCCTTAAAACGCCCTCAAGGCATGATA TTAATGACAGGCCCTACAGGTAGTGGGAAAACCGTTTCGCTTTATTCCGGCCTTAATATTCTCAACACTACAGAACAAAA CATTTCAACGGCGGAAGATCCAGTTGAGATCAACTTAAATGGGATCAACCAAGTTCAAGTTAACCCTAAAATCGGCCTTA CTTTCGCTCACGCTTTACGATCTTTTTTACGTCAAGATCCCGATATCGTCATGGTAGGTGAAATACGAGATCTCGAAACC GCAGAGATTGCGGTCAAAGCAGCTCAAACCGGGCACTTAGTTCTTTCTACCCTACATACAAATTCCGCAGCAGAAACCGT CGTTCGACTAGGCAACATGGGGATTGAAAACTTTAACTTAGCCTCCTCTCTTAGTTTGATCATTGCTCAACGATTGGCTC GTCGCCTCTGTAATTTATGCAAACAAGAAGATCATTTAAGTGATGAGTTGCGAGAAGAATATAACATTGTACCTTCAGCC ATTATTTATCAAGCCAATAAAGAAGGTTGCAATGAGTGCACTCATGGTTACTCAGGGCGTATTGGTATTTATGAAGTAAT GCCGTTCACCCGAGAGCTGTCTGTTGCCATTTTAAAAGGTGCGACCGTTAGACAAATAGAACAAATTGCCATTCAACAAG GTATGGATAACCTAAAAACCTCAGGAATTAAACGATTAGAAGATGGCACAACCAGCTTACAAGAACTAAACCGTGTGCTC TATTTTTAA Protein sequence : MHTNLASILRQAELISATQENSIIESVQAETHTVPSAILAQGIFTPDELVSHLAQIFGLEVINVTQFDYAATCQKLGLRD LITRYQALPVNHDSCTIRLAVADPSIAQIEDDFRFTSGKQIELVLADQGQIQAAIRRVYGAGLSANDNQHKEITQDELAS LVDVSLDEISATEDLSQDDAPVTRFINQILLEAVRKGVSDIHFEPYEDNYRVRFRCDGILVENSRPSAHLSRRLSARLKI MAKLDIAERRLPQDGRIKLKLNSTTSIDMRVSSLPTLWGEKIVLRLLDSSAANLNIDKLGYSDQQKALYLEALKRPQGMI LMTGPTGSGKTVSLYSGLNILNTTEQNISTAEDPVEINLNGINQVQVNPKIGLTFAHALRSFLRQDPDIVMVGEIRDLET AEIAVKAAQTGHLVLSTLHTNSAAETVVRLGNMGIENFNLASSLSLIIAQRLARRLCNLCKQEDHLSDELREEYNIVPSA IIYQANKEGCNECTHGYSGRIGIYEVMPFTRELSVAILKGATVRQIEQIAIQQGMDNLKTSGIKRLEDGTTSLQELNRVL YF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-85 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-85 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_002156983.1 | type IV-A pilus assembly ATPase PilB | VFG0112 | Protein | 4e-126 | 51 |
| pilB | YP_002156983.1 | type IV-A pilus assembly ATPase PilB | VFG1880 | Protein | 1e-114 | 50 |
| pilB | YP_002156983.1 | type IV-A pilus assembly ATPase PilB | VFG2048 | Protein | 3e-86 | 49 |
| pilB | YP_002156983.1 | type IV-A pilus assembly ATPase PilB | VFG0233 | Protein | 5e-104 | 45 |
| pilB | YP_002156983.1 | type IV-A pilus assembly ATPase PilB | VFG0182 | Protein | 9e-85 | 44 |
| pilB | YP_002156983.1 | type IV-A pilus assembly ATPase PilB | VFG1876 | Protein | 6e-79 | 44 |
