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Name : VFMJ11_2162 (VFMJ11_2162) Accession : YP_002156856.1 Strain : Genome accession: NC_011184 Putative virulence/resistance : Virulence Product : lysine decarboxylase, constitutive Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 2297085 - 2299223 bp Length : 2139 bp Strand : - Note : identified by match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711 DNA sequence : ATGAATATTTTTGCTATCCTAAATCACTCAGGTGTTTTCTTTAAAGAAGAGCCAGTTCGCGAATTGCATGCTTCTTTAGA AAAAGCAGGCTATAAAGTGGTTTACCCAGTAGATGCACAAGATCTATATAAAATGATTGAAATGAACCCACGTATTTGTG GTGTGCTATTTGACTGGGATAAATACTCACTAGATCTATGTACTGAAATTAATGCATTGAATGAAAAATTGCCGCTATAT GCATTTGCAAACCAACATTCAACATTAGATATTTCATTAACTGATTTACGTCTAAACCTACATTTCTTCGAATATGCGTT AGATATGGCTGATGATATCGCTTTGAAAATTAATCAAGCGACAGAAGAGTACAAAGACCAAATCATGCCTCCTTTTACTA AGGCACTATTTAAATATGTAGAAGAGGGTAAATATACCTTCTGTACTCCAGGTCACATGGGTGGTACGGCTTTCCAAAAA AGTCCAGCTGGTAGTATCTTCTATGATTTCTACGGTCCAAACGCATTTAAAGCGGACGTATCAATCTCAATGCCTGAACT AGGTTCATTACTTGATCACTCAGGTCCTCATAAAGAAGCTGAAGAGTACATCGCTCGTACCTTTAATGCAGATAGCTCTT ACATCGTAACTAACGGTACGTCTACATCAAACAAAATTGTAGGTATGTACTCAGCACCTGCAGGTAGTACAGTACTTGTT GACCGTAACTGTCACAAATCACTGACTCACATGATGATGATGAGTGATGTAACACCTATCTATTTCCGTCCAACACGTAA TGCTTACGGTATTTTAGGTGGCATCCCACAAAGCGAATTTACTCGTGAAGTGATTGAGCAAAAAGTAGCAGCAACACCAA ACGCAACTATGCCGGGTTATGCGGTTATTACTAACTCAACTTACGATGGTCTTCTATATAACACTCAATACATTAAAGAA ACGCTAGATACTAAATACATTCACTTTGATAGTGCTTGGGTTCCTTACACTAACTTCAACAAAATCTATGAAGGTAAGTG TGGTATGAGTGGCGAAGCAATGCCAGGTAAAGTGTTCTACGAAACACAATCAACTCATAAACTACTGGCTGCGTTCTCTC AAGCATCAATGATCCACGTAAAAGGGGAATTTGATAAAGAGTCATTTAACGAAGCCTTCATGATGCATACATCAACATCA CCTCAATACGGTATTGTTGCATCAACTGAAACGGCTGCGGCAATGATGCGTGGTAATACAGGTAAGAAACTGATCCAAGA TTCAATTGATCGTGCGATTCGTTTCCGTAAAGAGATCAAACGTCTTCAAAGCGAAAGTGACAGCTGGTTCTTTGATGTAT GGCAACCAGAAAACATCGATACAACTGAATGTTGGAAACTGGATCCAAAAGATTCATGGCACGGCTTCAAGGACATCGAT GATGATCACATGTACCTTGATCCAATCAAAGTAACGCTATTAACTCCAGGAATGAACGAAAATAGCGAAATGGGCGAGAC TGGTATTCCTGCATCAATCGTTGCTAAATACTTAGATGAACGCGGTATCGTAGTAGAGAAAACAGGTCCATATAACCTAT TGTTCCTATTCTCTATCGGTATTGATAAATCAAAAGCAATGCAATTACTACGTGCATTAACGGACTTTAAACGTGGCTTC GATCTTAACTTAACAGTGAAAAACTTCCTTCCTTCACTGTACAACGAAGATCCAAGTTTCTATGAAGGTATGCGAGTACA AGAACTGGCACAAGGCATTCACGATTTAACTCGTAAATACCGTTTACCAGAGCTGATGTTCAAAGCGTTCGATGTACTTC CTGAATTAAAAGTAACACCACATGCAGCATGGCAAGAAGAGCTTCGCGGTAACGTAGAAGAAGTGCCTCTAGCTGATTTG GTAGACCGTGTAAGTGCGAATATGATCCTACCTTACCCACCGGGTGTGCCTCTAGTACTTCCAGGTGAAATGGTAACAGC TGAATCTCGCCCAGTACTTGATTTCTTAGAAATGCTATGTGAAATCGGCGCTCATTACCCAGGTTTTGAGACTGATATTC ACGGTGTATATGCTCAAAAAGATGGCAGTTACACAGTGAAAGTACTAAAACAAAATTAA Protein sequence : MNIFAILNHSGVFFKEEPVRELHASLEKAGYKVVYPVDAQDLYKMIEMNPRICGVLFDWDKYSLDLCTEINALNEKLPLY AFANQHSTLDISLTDLRLNLHFFEYALDMADDIALKINQATEEYKDQIMPPFTKALFKYVEEGKYTFCTPGHMGGTAFQK SPAGSIFYDFYGPNAFKADVSISMPELGSLLDHSGPHKEAEEYIARTFNADSSYIVTNGTSTSNKIVGMYSAPAGSTVLV DRNCHKSLTHMMMMSDVTPIYFRPTRNAYGILGGIPQSEFTREVIEQKVAATPNATMPGYAVITNSTYDGLLYNTQYIKE TLDTKYIHFDSAWVPYTNFNKIYEGKCGMSGEAMPGKVFYETQSTHKLLAAFSQASMIHVKGEFDKESFNEAFMMHTSTS PQYGIVASTETAAAMMRGNTGKKLIQDSIDRAIRFRKEIKRLQSESDSWFFDVWQPENIDTTECWKLDPKDSWHGFKDID DDHMYLDPIKVTLLTPGMNENSEMGETGIPASIVAKYLDERGIVVEKTGPYNLLFLFSIGIDKSKAMQLLRALTDFKRGF DLNLTVKNFLPSLYNEDPSFYEGMRVQELAQGIHDLTRKYRLPELMFKAFDVLPELKVTPHAAWQEELRGNVEEVPLADL VDRVSANMILPYPPGVPLVLPGEMVTAESRPVLDFLEMLCEIGAHYPGFETDIHGVYAQKDGSYTVKVLKQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 76 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VFMJ11_2162 | YP_002156856.1 | lysine decarboxylase, constitutive | VFG1670 | Protein | 0.0 | 63 |
