Gene Information

Name : rdgC (VFMJ11_2126)
Accession : YP_002156820.1
Strain :
Genome accession: NC_011184
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 2254913 - 2255827 bp
Length : 915 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGATGTGGTTTAAAAATTGTTTAATTTATCGTTTTACTAAAGAGATTGACCTCAATCCAGAACAACTTGAAAAACAACT
GAACGATTTTCGTTTCACGCCATGTGGCAGCCAAGATATGCAAAAATTTGGCTGGGTGACAGCAATGGGCCGACACGGTG
ATATGCTGACTCACGTAGCGAGCAATAATATTCTTATCTGTGCCAAGAAAGAAGAAAAAATGCTTCCTGCATCTGTCATT
AAAGAGTCAATGAATGCAAAAATTGATGCTCTTGAAGCAGAACAAGGTCGCCCTCTAAAGAAAAAAGAAAAAGACGCAAT
TAAAGACGATATCGTGGTTGATTTGCTTCCTAGAGCATTCAGTAAGCACCAACAAACGTATGCGTTAATCCTTCCTGAAT
CAGGCTTTATCATTGTCGATGCTGGCAGTTACAAAAAAGCAGAAGACGTTTTAGCACTACTTCGTAAATCTATTGGTAGT
TTGCCTGTTGTTCCTCTTACCTCCACTCAACCAATTGAGAATGCATTAACGGAATGGGTGAAAACTGGCACTTGTCCTCA
AGGTTTTGAGATGGGTGAAGAAGCCGAGCTAAAAGCTATTTTAGAAGATGGCGGTGTGATTCGTTGTAAGCAACAAGAAC
TTGTATGTGATGAGATCCACGCTCACATTGATGCGAACAAAGTAGTGACAAAATTAGCGCTAACTTGGCAAGAGCGTTTA
GAGTTTATTCTTGCCGATGACCTGTCTCTAAAACGTTTAAAATTCAGCGATGAAATTAAAGATCAAAATGAAGATATTGG
TTTTGAAGACAAAGCAGCACGCTTTGATGCCGATTTCTCGCTAATGAGTTCTGAGCTTGATGCACTTCTACCTGATCTTT
TCAAAGCACTTGGTGGCATTGAAGAGAAAGAATAA

Protein sequence :
MMWFKNCLIYRFTKEIDLNPEQLEKQLNDFRFTPCGSQDMQKFGWVTAMGRHGDMLTHVASNNILICAKKEEKMLPASVI
KESMNAKIDALEAEQGRPLKKKEKDAIKDDIVVDLLPRAFSKHQQTYALILPESGFIIVDAGSYKKAEDVLALLRKSIGS
LPVVPLTSTQPIENALTEWVKTGTCPQGFEMGEEAELKAILEDGGVIRCKQQELVCDEIHAHIDANKVVTKLALTWQERL
EFILADDLSLKRLKFSDEIKDQNEDIGFEDKAARFDADFSLMSSELDALLPDLFKALGGIEEKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 3e-70 51