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Name : VFMJ11_0189 (VFMJ11_0189) Accession : YP_002154960.1 Strain : Genome accession: NC_011184 Putative virulence/resistance : Virulence Product : UDP-D-quinovosamine 4-dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 207629 - 209536 bp Length : 1908 bp Strand : + Note : identified by match to protein family HMM PF01370; match to protein family HMM PF02719 DNA sequence : ATGCAATTTTTACAGCCGGTTTGGGGGATGCCAAGACCATTGAAGCGTCTTGTGAGTATCGTTGTTGATGTTTTATTTAT TGTTTTTGCTTTTTGGGCTGCTTTTGCTACACGTTTAGATGGTATTGAAGTGTATATGCAGCAAGTTTCTTATTGGAAGC TGCTCGCTATATTGATCCCTTGCACATTGCTAGTTTTCACTAAAAGTGGTTTATATCGTGCGATTCTTCGTTATTTAAGT TTACATGCAGTTCTAAGTATCTGTATTTCTGCGATTATATCTTCTGCTTTCATTGTTTTTATTTCGTACTTTAACTATCT GTACATGCCTCGTTCTATACCCGTAATATATGCAACTTATTTGGTTATGTTATGTGGTGGTTCAAGATTAATCGTTCGAG TTTTAGTTTCGGATCTATTAGGAAAACAGAAGAAGAAAGTATTGATTTATGGAGCTGGTTCTGCAGGCTTACAATTAGCT AATATGTTACGTCAGGGAAAGGAGTTCCATCCTGTTGCATTCATTGATGATGATAGAAAAAAACATAAAACAACAATGCA AGGTATTACTATTTATCGACCTAAATACCTTGAAAGATTAATAAAAAAATATTGTATATCAACAGTGCTATTAGCTGTTC CTTCTGCTTCTCAAGTTCAGAAAAAAATAGTTATTGAGTCTTTAGCGAAGTTGCATGTTGAGGTTTTGACAATCCCTAAT TTAGACGATTTAGTTAACGGTAAGTTGTCTATCGGGCAGCTTAAAGAAGTCTCTATTGATGACTTGTTGGGACGTGTGGC TGTAACCCCTCAAGCTGAATTAATGGAAGCCAATATTAAAGATAAAGTAGTGATGGTTACCGGTGCTGGAGGATCTATTG GTTCAGAGCTTTGCCGACAAATTATTCTTAATAAACCAAGTACTTTAGTTTTATTTGAGCTTTCTGAGTTTAGTTTGTAT CAGATTGAACATGAGTTATCGCAAATAATTATAAATGAACAGTTATCGATAAATGTAGTGCCTTTACTTGGTTCTGTTCA GCGGTTAAATAGATTAGCTGCAACGATGAAAGCATTTAAAGTACAAACGGTTTACCATGCAGCGGCATATAAACATGTAC CTCTGGTTGAATATAACGTGGTTGAAGGTGTTCGAAATAATATTTTTGGAACAAACTACACTGCACAAGCTGCCATTGAA GCAAAGGTTGAGTCTTTTGTATTAATTTCGACAGATAAAGCGGTTCGACCTACCAATGTGATGGGTACAACTAAGAGAAT GGCTGAACTTGGTTTGCAGGCTTTAGCACAAGTTGAAAATGCAAAGCCTAACGGCACTCGTTTTTGTATGGTTCGTTTTG GTAATGTGCTTGGTTCATCTGGTTCTGTTATTCCACTGTTTAAAAAGCAAATAGCGCAAGGTGGCCCAATAACATTAACT CATAAAGATATTACTCGTTACTTTATGACCATTCCTGAAGCGGCTCAATTAGTGATCCAAGCTGGAGCGATGGGTAAAGG CGGAGATGTTTTTGTTTTGGATATGGGAGAGTCAGTGAAGATAGCTGATCTTGCTCGTAATCTGATTCATTTATCTGGTC TAGAAGTGCGAAGTGATGAAAACCCTGATGGCGATATAGAGATCCGATGTACAGGTCTTCGTCCGGGTGAAAAATTATAT GAAGAGCTGTTGATTGGAGATAATGTGGGTAAAACCGCTCATGAGCGTATTATGACTGCTAATGAGGAGTTTTTACCTTT AAACGAATATAACCAATTGTTAGATGATTTAGATACTGCTTGTCATAATTTTGATCATGCCACTATTCGACAACTATTAA TTGATGCTCCTACAGGGTTTGCTCCTGTTGATGGTATTGGTGATTTAGTTTGGAAGGCTGAGCAATAA Protein sequence : MQFLQPVWGMPRPLKRLVSIVVDVLFIVFAFWAAFATRLDGIEVYMQQVSYWKLLAILIPCTLLVFTKSGLYRAILRYLS LHAVLSICISAIISSAFIVFISYFNYLYMPRSIPVIYATYLVMLCGGSRLIVRVLVSDLLGKQKKKVLIYGAGSAGLQLA NMLRQGKEFHPVAFIDDDRKKHKTTMQGITIYRPKYLERLIKKYCISTVLLAVPSASQVQKKIVIESLAKLHVEVLTIPN LDDLVNGKLSIGQLKEVSIDDLLGRVAVTPQAELMEANIKDKVVMVTGAGGSIGSELCRQIILNKPSTLVLFELSEFSLY QIEHELSQIIINEQLSINVVPLLGSVQRLNRLAATMKAFKVQTVYHAAAYKHVPLVEYNVVEGVRNNIFGTNYTAQAAIE AKVESFVLISTDKAVRPTNVMGTTKRMAELGLQALAQVENAKPNGTRFCMVRFGNVLGSSGSVIPLFKKQIAQGGPITLT HKDITRYFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKIADLARNLIHLSGLEVRSDENPDGDIEIRCTGLRPGEKLY EELLIGDNVGKTAHERIMTANEEFLPLNEYNQLLDDLDTACHNFDHATIRQLLIDAPTGFAPVDGIGDLVWKAEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-82 | 48 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-77 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VFMJ11_0189 | YP_002154960.1 | UDP-D-quinovosamine 4-dehydrogenase | VFG0029 | Protein | 4e-120 | 48 |
| VFMJ11_0189 | YP_002154960.1 | UDP-D-quinovosamine 4-dehydrogenase | VFG1300 | Protein | 3e-80 | 48 |
