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Name : VFMJ11_0161 (VFMJ11_0161) Accession : YP_002154932.1 Strain : Genome accession: NC_011184 Putative virulence/resistance : Virulence Product : VI polysaccharide biosynthesis protein VipA/tviB Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : 1.1.1.- Position : 178452 - 179699 bp Length : 1248 bp Strand : + Note : identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026 DNA sequence : ATGCTAATTGAAGATTCAAAAATTGCAATTGTAGGCCTTGGTTATGTAGGTCTTCCGCTGGCTTTGGAGTTTGGGAAGAA ATATCAAACGATTGGATATGATTTAAATGAAAGAAGGATCTCTGAACTCAAGAATAATATTGATGTCACATTAGAATGTA CTACCGAGGAGATAAAATCTTCAAAAAATATTACATTTAGTTTTGATATTAAAGATATAGAAAACTGTAATGTGTATATT GTTACAGTTCCTACACCTATAACTGAATTCAATCAACCGGATTTAGGACCATTAATTAGTGCTTCGAGATCTTTAGGCGG AATTCTCAAGTCTGGTGATATAGTTATATATGAATCGACTGTATATCCAGGAGCTACAGAAGAGGTATGTGTCCCTGAGT TAGAAAAATTTTCTGGATTAAAATATAATAAAGATTTTTACGCAGGCTATTCACCGGAAAGGATTAATCCTGGAGATAAA TTACATCGAGTTGCTAATATCCATAAGGTTACAAGTGGGTCTACTGCTGAAGTGGCAAATTTTGTAGATACGCTTTATAG CTCTGTAATCACTGCGGGTACACACAAGACTACTAGTATAAAAGTAGCAGAAGCTTCGAAACTAATTGAAAATATTCAAA GAGATGTAAATATTGCTCTAGTTAACGAATTGCATCAAATATTTGGGAAACTAGGTATTAATACTAGAAAGGTAATTGAT GCCGCTTCTACCAAATGGAACTTTATGAAGCTTTATCCAGGATTAGTAGGTGGGCATTGCATTAGTGTTGATCCCTATTA TATGCTTCACAAATCGTCGTCAATTGGTTATATACCAGATATGATTCGTACTGCTAGAGAAGTCAATAATGGTATGAGCG ATTATTTAGCTAGTGATTTTATTGAAGAGCTTGTAAAGAAAAAAATAGACTTCGCACAGAAAAAAATAGTAATTTTAGGT TTTGCTTTTAAAGAAAATTGTCCTGATTTAAGAAATACGAAGGTATATAATCTTTATTTGAAATTAACTTCATTAGGTTT AGATGTTACAATTTATGATCCATTAGTTGATGTTGAAGAAGCAGAACATGAATATTCAGTAAGTGTTACAAATAAAATTG ATAATTGCTTTGATATTGCATTTTTAGCAGTGTCACATGATGGAATAATTGAATCGATAGAAAAAGAATTTAACTTCGAA TATATATATGACTTTAAAAATTCATTAAATATCAATGAAAATAAGTAA Protein sequence : MLIEDSKIAIVGLGYVGLPLALEFGKKYQTIGYDLNERRISELKNNIDVTLECTTEEIKSSKNITFSFDIKDIENCNVYI VTVPTPITEFNQPDLGPLISASRSLGGILKSGDIVIYESTVYPGATEEVCVPELEKFSGLKYNKDFYAGYSPERINPGDK LHRVANIHKVTSGSTAEVANFVDTLYSSVITAGTHKTTSIKVAEASKLIENIQRDVNIALVNELHQIFGKLGINTRKVID AASTKWNFMKLYPGLVGGHCISVDPYYMLHKSSSIGYIPDMIRTAREVNNGMSDYLASDFIEELVKKKIDFAQKKIVILG FAFKENCPDLRNTKVYNLYLKLTSLGLDVTIYDPLVDVEEAEHEYSVSVTNKIDNCFDIAFLAVSHDGIIESIEKEFNFE YIYDFKNSLNINENK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-102 | 55 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-102 | 55 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-91 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VFMJ11_0161 | YP_002154932.1 | VI polysaccharide biosynthesis protein VipA/tviB | VFG0431 | Protein | 9e-103 | 55 |
