|
Name : VFMJ11_0153 (VFMJ11_0153) Accession : YP_002154924.1 Strain : Genome accession: NC_011184 Putative virulence/resistance : Unknown Product : polysaccharide export protein GfcE Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1596 EC number : - Position : 170115 - 171260 bp Length : 1146 bp Strand : + Note : identified by match to protein family HMM PF02563 DNA sequence : ATGAGTAAAACACATCGTTCTTTGGCTTCTGCTCTACTTTTGGTTATGTTGAGTGGTTGTACTGTTTTCCCTGGTTCGCA CATCTCGACATCAGATAAAAACAAAGTGGAAGAAGAACAGAGTGAAGACAATCAAAATACTTACTCTTCAGACATTAATG TGTATGAGCTAACGCCACAAAAAGTAGCGGATTACCAAGTTAAGCAAGCATCAGCTCAAGCAAATTTAGAACTTGAAGAG CAAGTGGCAAGTTACGAATACCGTGTTGGCCCTGGGGATATTTTAAACGTCACCATTTGGGATCACCCTGAGTTAACTAT TCCTGCTGGTTCATACCGTAGTTCAAGTGAATCAGGTAACTGGGTTCATGCTGATGGCACCATCTTTTACCCTTACATCG GTACGGTAGAAGTGGAAGGCAAAACCGTTCGTGAAATCAGAACGGAAATTGCTCAAAAATTAAGAAAGTTTATTGAAAGC CCACAAGTGGACGTTAACGTAGCGGCGTTTCGTTCTAAAAAAGCTTACGTAACCGGTGAAGTAGATAAACCAGGTCAACA AGCCATTACTAATATTCCATTAACGTTACTGGATGCGGTTAATCGCTCGGGTGGGTTAGGTGAAGATGCAGATTGGCGAA ATGTGACATTAACTCGTAACGGCAAAGAAGAAACCTTATCTCTTTATGCATTAATGCAGCGTGGTGATTTAACTCAAAAC CGTTTATTGCAATCTGGCGATATTATTCATGTTCCTCGTAACGACACTCAAAAAGTATTTGTCATGGGTGAAGTGAAAGA CCCGAAACTACTTAAGATGGACCGTTCAGGCATGAGCCTAACCGAAGCGTTAAGCAGTGTTGGCGGCATTAATGAATTAT CAGCCGATGCAACAGGGGTTTTTGTTATTCGCTCATCAAGCCCAGATAAAAAACAAGAAAGCATGGCGGATATTTATCAG TTAAATATTAAAGATGCTTCTGCACTTATTATTGGTACTGAATTTGATTTAAAACCTTACGATATCGTTTATGTTACTGC AGCGCCAATTACTCGTTGGAACCGCTTGATCATGCAACTTATGCCAACCATTACAGGCTTTAATGAGTTGACGGAAGGGG CGTTACGAGTGAAGAACTGGCCTTAA Protein sequence : MSKTHRSLASALLLVMLSGCTVFPGSHISTSDKNKVEEEQSEDNQNTYSSDINVYELTPQKVADYQVKQASAQANLELEE QVASYEYRVGPGDILNVTIWDHPELTIPAGSYRSSSESGNWVHADGTIFYPYIGTVEVEGKTVREIRTEIAQKLRKFIES PQVDVNVAAFRSKKAYVTGEVDKPGQQAITNIPLTLLDAVNRSGGLGEDADWRNVTLTRNGKEETLSLYALMQRGDLTQN RLLQSGDIIHVPRNDTQKVFVMGEVKDPKLLKMDRSGMSLTEALSSVGGINELSADATGVFVIRSSSPDKKQESMADIYQ LNIKDASALIIGTEFDLKPYDIVYVTAAPITRWNRLIMQLMPTITGFNELTEGALRVKNWP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf39 | AAO18064.1 | Orf39 | Not tested | TTSS locus | Protein | 1e-110 | 59 |
