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Name : potB (VFMJ11_1392) Accession : YP_002156111.1 Strain : Genome accession: NC_011184 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter membrane protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 1479600 - 1480373 bp Length : 774 bp Strand : + Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component DNA sequence : ATGATCATCGGTACTAGCTTCTTAACTCGTGATGAAGCAAATTTAATCGAAATGACGTTTACGATGGATAACTATCTACG TCTTTTTGATCCACTATATGCAAAAGTGCTGTGGCATTCATTTTATATGGCCATTGTTGCAACGTTAATCTGTTTGGTTG TGGGTTACCCATTTGCCTACATCGTTGCAAAAATGCCTGAAAGATGGCGTCCATTTATGCTGTTTTTAATTATTGTTCCT TTTTGGACTAACTCGTTAATCCGTACTTATGGTTTAAAAATTGTGTTAGGTACTCAAGGTATTTTAAATAAAAGCCTAAT TGCAATGGATATCATCGATAAGCCATTACGCATTATGTACACAGAAACAGCAGTAATGATTGGTTTGGTTTATATTCTAT TACCTTTCATGATTTTGCCACTGTATTCAGCAATTGAAAAACTTGACGGTACTTACTTAGAAGCGGCTCGTGATCTAGGT GCAAACAAACTTCAAACTCTATGGAAGATTGTATTGCCACTAACAATGCCAGGTATCATTGGCGGTTGTTTATTAGTATT ACTTCCAGCTCTTGGTATGTTCTATATTTCTGACCTATTAGGTGGTGCGAAAAACCTACTAATTGGTAACGTAATTAAGA GCCAAGTATTGAACGCACGTGATTGGCCATTTGGTGCAGCAACCAGTATCGCCCTCACCTTGGCGATGGCATTAATGCTT TATGCTTACTACCGTGCAGGCAAGTTATTAAACAAAAAGGCGGATCTAGACTAA Protein sequence : MIIGTSFLTRDEANLIEMTFTMDNYLRLFDPLYAKVLWHSFYMAIVATLICLVVGYPFAYIVAKMPERWRPFMLFLIIVP FWTNSLIRTYGLKIVLGTQGILNKSLIAMDIIDKPLRIMYTETAVMIGLVYILLPFMILPLYSAIEKLDGTYLEAARDLG ANKLQTLWKIVLPLTMPGIIGGCLLVLLPALGMFYISDLLGGAKNLLIGNVIKSQVLNARDWPFGAATSIALTLAMALML YAYYRAGKLLNKKADLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 6e-72 | 70 |
