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Name : VFMJ11_1260 (VFMJ11_1260) Accession : YP_002155981.1 Strain : Genome accession: NC_011184 Putative virulence/resistance : Resistance Product : transporter, AcrB/D/F family Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 1332744 - 1335821 bp Length : 3078 bp Strand : + Note : identified by match to protein family HMM PF00873 DNA sequence : ATGAGCCAAGAAAAAGGAATTGCAGCTTATTTCATACAGAATAAAGTCATCAGTTGGATGCTAACACTGATCTTTATGAT TGGTGGTACATCCGCATTTTTTGGTTTAGGCCGTTTAGAAGACCCAGCGTTTACCATTAAAGATGCTATGGTCGTAACGA ATTATCCTGGCGCGACACCAGAGCAAGTGGAAGAAGAAGTAACCTATCCACTAGAAAAAGCAATTCAACAGTTAACTTAT GTAGATGAAGTTAACTCGCTGTCTAGTCGCGGTTTGTCTCAGATCACTGTAACCATGAAAAATAATTATGGTCCTGATGA TTTACCGCAAATTTGGGATGAATTGCGCCGTAAGGTCAATGACTTGAAACGTCAATTACCTCCAGGTGTTGGTGAACCAT CAGTTATCGATGATTTTGGTGATGTTTATGGGGTGCTTTTAGCCGTAACAGGAAAAGGCTACTCATATAAAGAAATCCTA GATTATGTTGATTATTTGCGTCGTGAATTAGAGCTTGTTGATGGCGTTAGTAAAGTATCTGTTAGTGGTGTTCAACAAGA GCAAGTGTTTATTGAAGCATCATTAAAGCGTATGACAAGTTTAGGAATTTCTCCTCAGACGTTGTATAGCTTATTGTCTA ATCAAAATACGGTATCGAGTGCTGGTGCTGTAAAAATCGGAACGGAATATATTCAAATTCACCCAACAGGGGAGTTTGAA GATGTGGCACAACTTGGTGATTTAATCATTACTGATGGTGGCGCTCAAGGGCTGATTTATTTAAAAGACATCGCGGAAGT TAAGCGTGGTTATGTTGAAGTGCCAAGTAATATTGTTAACTTTAATGGTAATTTTGCTTTAAACCTGGGTGTTTCATTTA GTGCAGGTGTTAACGTAGTTGAAATTGGTAAATTAGTTGACCAACGAATGGCTGAGCTTAAAGAGCAGCAGCCTATTGGT ATTGATATCTCTGAAATTTACAGTCAACCAAAAGAAGTTGATAAATCGGTAAGTGGTTTTGTAGTCAGTCTTGGTCAGGC TGTTGCGATTGTAATTATCGTTTTACTTTTCTTTATGGGAGTACGTTCAGGTCTATTAATTGGTCTTATCCTATTATTGA CCGTTGCTGGTACTTTCGTCTTTATGAAGTATTTTGCTATCGATTTACAACGTATTTCTCTTGGTGCACTGGTTATTGCT CTCGGTATGCTCGTAGATAACGCCATTGTGGTGGTCGAAGGCATACTCATCGGGATGCAAAAAGGAAGGACGCGTTTACA AGCCGCTACCGATATTGTGACACAAACAAAATGGCCATTGTTAGGAGCAACGGTTATTGCGGTAACCGCGTTTGCACCAA TTGGTTTATCTGATGATGCGACCGGTGAATACTGTGGAACGCTCTTTACCGTCTTGCTAATTTCGTTAATGCTAAGTTGG TTTACTGCTATTTCACTTACGCCTTTCTTTGCTTCTTTATTCTTTAAAGAGAGAGTACAAAGCGAAGAAGAGAGTCTTGA AGAGAAAGACCCATACAATGGGATGATTTTTGTTGTTTATAAGCGTTTCCTAGAGTTTTGTATGCGCTACTCTGTAGCAA CCATGGTAATACTGGTTGTAGCTCTTGGTGGTAGTTTATATGGCTTTACCAAAGTTAAACAATCTTTCTTCCCATCATCA ACAACGCCAATCTTCATGGTGGATGTATGGATGCCTGAAGGGACAGATATTCGTTCAACTAATGCAACATTAAAAGAGTT AGAAGAATGGATATTAGAACAGCAACATATTGAACACGTAACAACAACAGCAGGTAAAGGTTTACAACGTTTTATGCTGA CTTATGCACCAGAGAAAAGCTACGCAGCTTATGGTGAAATAATGACACGTGTTGATAACTATGAAGCTTTACAGCCATTA ATGGCGAAATTCCGTCAGCATATCGAAGATCAATATCCGCAAATACAGTATAAGTTAAAACAAATTGAATTAGGGCCTGG TGGCGGTGCAAAAGTAGAAGCGCGTATTGTTGGTGCTGATCCGACAGTATTACGTGGTTTAGCTGCACAAGTTATCGATA TTATGCATAATGATCCGGGAGCAACGAATGTACGTCATGACTGGCGTGAGCGTACAAAAGTACTTGAGCCTCAGTTTAAT GAGAGTCAAGCTCGTCGTTACGGTATCTCAAAGACAGATGTAAACGAACTATTAGAGATGGCATTCTCTGGTAAAGCAAT CGGTGTATACCGTGATGGTACAACATTGATGCCTATTGTTACTCGTTTACCTGAGAATGAACGTGTTGATATTAGTACGA TTGAAGGCATGAAAATTTGGAGTCCAGCTCTGTCTCAATACATCCCATTACAGCAAGTTGTATTTGGTTATGATGTGATT TGGGAAGATCCACAAATCGTACGTAAAAACCGTAAGCGTATGCTGACCGTAATGGCTGACCCTGATATTTTAGGTGAAGA AACTGCAGCTACATTGCAGAAACGATTACAAACTCAAATTGAACAGATCGATTTCCCTACGGGTTACAGTTTAGAGTGGG GCGGTGAATACGAATCGTCTCGTGATGCTCAAGCGTCATTATTCCAAACGATGCCATTAGGTTACTTGTTTATGTTCTTA GTCACCGTGTTCTTATTTAACAGTGTGAAAGAGTCTGTAATTGTGTGGTTAACGGTACCATTAGCTATTATTGGTGTAAC CAGTGGTCTATTGTTACTTAATACGCCATTTGGTTTTATGGCCTTACTCGGTTTCTTGAGCTTGAGTGGTATGCTGTTGA AAAATGGTATCGTGCTGCTTGATCAGATTGAAATTGAAATCAAATCAGGTAAAGAACCTTATCATGCGGTGGTTGATGCG GCATTAAGCCGTGTGCGTCCCGTTTGTATGGCTGCGATTACAACAATTCTAGGTATGATACCTCTATTGCCTGACATATT CTTTAAGCCAATGGCGGTAACGATTATGTTCGGTTTAGGTTTTGCGACCGTTCTTACTCTAATTGTCGTTCCAGTTCTAT ATCGAATGTTCCACAGAATTAAAGTAGTGGAATACTAA Protein sequence : MSQEKGIAAYFIQNKVISWMLTLIFMIGGTSAFFGLGRLEDPAFTIKDAMVVTNYPGATPEQVEEEVTYPLEKAIQQLTY VDEVNSLSSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKRQLPPGVGEPSVIDDFGDVYGVLLAVTGKGYSYKEIL DYVDYLRRELELVDGVSKVSVSGVQQEQVFIEASLKRMTSLGISPQTLYSLLSNQNTVSSAGAVKIGTEYIQIHPTGEFE DVAQLGDLIITDGGAQGLIYLKDIAEVKRGYVEVPSNIVNFNGNFALNLGVSFSAGVNVVEIGKLVDQRMAELKEQQPIG IDISEIYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGVRSGLLIGLILLLTVAGTFVFMKYFAIDLQRISLGALVIA LGMLVDNAIVVVEGILIGMQKGRTRLQAATDIVTQTKWPLLGATVIAVTAFAPIGLSDDATGEYCGTLFTVLLISLMLSW FTAISLTPFFASLFFKERVQSEEESLEEKDPYNGMIFVVYKRFLEFCMRYSVATMVILVVALGGSLYGFTKVKQSFFPSS TTPIFMVDVWMPEGTDIRSTNATLKELEEWILEQQHIEHVTTTAGKGLQRFMLTYAPEKSYAAYGEIMTRVDNYEALQPL MAKFRQHIEDQYPQIQYKLKQIELGPGGGAKVEARIVGADPTVLRGLAAQVIDIMHNDPGATNVRHDWRERTKVLEPQFN ESQARRYGISKTDVNELLEMAFSGKAIGVYRDGTTLMPIVTRLPENERVDISTIEGMKIWSPALSQYIPLQQVVFGYDVI WEDPQIVRKNRKRMLTVMADPDILGEETAATLQKRLQTQIEQIDFPTGYSLEWGGEYESSRDAQASLFQTMPLGYLFMFL VTVFLFNSVKESVIVWLTVPLAIIGVTSGLLLLNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEIKSGKEPYHAVVDA ALSRVRPVCMAAITTILGMIPLLPDIFFKPMAVTIMFGLGFATVLTLIVVPVLYRMFHRIKVVEY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 0.0 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VFMJ11_1260 | YP_002155981.1 | transporter, AcrB/D/F family | BAC0428 | Protein | 0.0 | 83 |
| VFMJ11_1260 | YP_002155981.1 | transporter, AcrB/D/F family | BAC0519 | Protein | 0.0 | 82 |
| VFMJ11_1260 | YP_002155981.1 | transporter, AcrB/D/F family | BAC0526 | Protein | 0.0 | 57 |
| VFMJ11_1260 | YP_002155981.1 | transporter, AcrB/D/F family | BAC0425 | Protein | 0.0 | 44 |
