Name : rph (VFMJ11_0109) Accession : YP_002154880.1 Strain : Genome accession: NC_011184 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 125531 - 126247 bp Length : 717 bp Strand : + Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGTCCTAGCGGAAGAACAGCTCAGCAAGTCCGTCCAATTACACTTACTCGTAACTTTACTGCACACGCAGAAGGTTC AGTATTAGTTGAATTTGGTAATACAAAAGTAATTTGTACTGCAAGTGTTGAAGAAAACGTTCCTCGCTGGTTAAAAGGCA AAGGGAAAGGTTGGGTAACCGCTGAGTACGGCATGTTACCTCGCGCAACACACACTCGTAACCGTCGTGAAGCAGCAAGC GGTAAACAAGGTGGTCGTACGATGGAAATCCAACGTTTGATCGCTCGTAGTTTACGTGCAGCCGTTGACCTAGAAGCGCT AGGTGAACAAATGATCACAGTTGATTGTGACGTTATTCAAGCTGACGGTGGTACTCGTACAGCATCTATTACGGGTGCAA GTGTGGCGTTAGCTGACGCAATTAATCACATGATTGCTACGGGTAAACTAAAATCGAACCCAATGAAAGGTCATGTAGCG GCGGTTTCTGTTGGTATCTACAACGGTGAAGCAATTTGCGACCTTGAGTATCTAGAAGACTCAGCAGCAGATACAGACAT GAACGTTGTCATGATGGAAGATGGCAAAATGATTGAAGTGCAGGGCACGGCAGAAGAAGCGCCGTTCTCTCACCAAGAAT TGTTAGACATGCTGGCTCTGGCGCAACAGGGCATCAATGACATTATTGAGAAGCAGAAAGCGGCATTGGCCGAATAA Protein sequence : MRPSGRTAQQVRPITLTRNFTAHAEGSVLVEFGNTKVICTASVEENVPRWLKGKGKGWVTAEYGMLPRATHTRNRREAAS GKQGGRTMEIQRLIARSLRAAVDLEALGEQMITVDCDVIQADGGTRTASITGASVALADAINHMIATGKLKSNPMKGHVA AVSVGIYNGEAICDLEYLEDSAADTDMNVVMMEDGKMIEVQGTAEEAPFSHQELLDMLALAQQGINDIIEKQKAALAE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 2e-60 | 58 |