Gene Information

Name : VFMJ11_1060 (VFMJ11_1060)
Accession : YP_002155781.1
Strain :
Genome accession: NC_011184
Putative virulence/resistance : Unknown
Product : type III restriction enzyme, res subunit
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 1110144 - 1111532 bp
Length : 1389 bp
Strand : +
Note : identified by match to protein family HMM PF04851

DNA sequence :
ATGCTGAGAAAGTGGCAAATAGAAGCGGTTAATTTAAGTCTTCATAAATATGAGAATGGTCAGCAGGATATATTATTACT
TGCTACACCTGGGGCCGGAAAATCAATAGCTGCGGCTGAAATAGCTTATCGATTAAAACAGACACATGAGATTGATTTTA
TTCTGTGCTTTTCACCATCATTGATTGTTGCTGAAGGGATGCGTTCTACTTTTTCTTACCGTTTTAATGCGTCATTTCAC
GGTACGATCGGAGCGGTTGGTGGGTCATATACTTATCAAAATATGCTTTATTTAAGTGATGATTTCTGGCAAATCTTAGA
AAACCATAATGTATTAGTTGTTTTTGATGAGATCCATCATTGCTCAGGATCTGATGTATCAGAATCTAATGCATGGGGTG
AAAAAATTCTAACTAAAATTCAATCGAAAGCAAAATATACGCTGGCATTAACTGGGACTCCATGGCGCAGTGATTTTACC
CCGATAACTCTTGCTAAATATACAGATCCAGATAATCAAATTTATTGTGATTATATCTATGGATTAGGGGAAGCCGTGAG
AGATAAAGTTTGTCGTAATCCTCATTTAGTACTTGTTGATAATAATACTTTTCAAGTAACCAAGAGTGAAGAGGGAAAAC
AAACATTTGGCAGTGTATCTGAGTTATTAAAGCATTCGTCTGTAAATTATGAATCAGTGATTACTCATCCAGAAACGATG
AATTACTTATTGAAGTTAAGTTGCCATAAATTGGCAGAAGTTAGGAAAGATAACCCAGAAGCGGCTGGGTTAGTCGTTGC
ATCATCGGTTAGCCATGCTATTGAGCTTTTAAATATACTCAAAACTAAATTCAAACAAACAGCAACCATTGTTACCTATA
GGCATGATAACCCATTAAATGAAATCGCAAACTTTAGGAGTAGTGATACACAGTGGATTGTTAGTGTTGGGATGATCTCT
GAAGGAACAGATATCCCTCGTTTACAGGTCTGTTGTCATTTGAGTACTGTAAAAACAGAGCTTTACTTTAGGCAGGTTCT
AGGGCGTATTTTGCGAGTGACTCAATCAAAAAATCAAGAAGCTTGGTTGTTCACAATTGCTGAATCAAAATTAACAGAGT
TTGCTGAGCGAATAGATGAAGATATACCTGATTATTCAGTGATAGAAAGATATATTGAAAGGGCTCAAAAGACTAATTTA
TTGCCTACAATGGTATTTGAGAATCTAGCTGATGCCTCTGAGTTAACGCAAAGACCTCTGAGTGAGCGTTTAGAGACAAT
GTTTGATGATTTGCCACTAAATAGTAATGCTAATTCATTCTTTTCAAATATTGCCTTACAAGGTGATTTCAAGCAGAGAG
TGATCTCTGTATTTAGTTACATGATTTAG

Protein sequence :
MLRKWQIEAVNLSLHKYENGQQDILLLATPGAGKSIAAAEIAYRLKQTHEIDFILCFSPSLIVAEGMRSTFSYRFNASFH
GTIGAVGGSYTYQNMLYLSDDFWQILENHNVLVVFDEIHHCSGSDVSESNAWGEKILTKIQSKAKYTLALTGTPWRSDFT
PITLAKYTDPDNQIYCDYIYGLGEAVRDKVCRNPHLVLVDNNTFQVTKSEEGKQTFGSVSELLKHSSVNYESVITHPETM
NYLLKLSCHKLAEVRKDNPEAAGLVVASSVSHAIELLNILKTKFKQTATIVTYRHDNPLNEIANFRSSDTQWIVSVGMIS
EGTDIPRLQVCCHLSTVKTELYFRQVLGRILRVTQSKNQEAWLFTIAESKLTEFAERIDEDIPDYSVIERYIERAQKTNL
LPTMVFENLADASELTQRPLSERLETMFDDLPLNSNANSFFSNIALQGDFKQRVISVFSYMI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13515.1 type III restriction enzyme Not tested PAGI-7 Protein 3e-92 50