|
Name : SeAg_B4808 (SeAg_B4808) Accession : YP_002149435.1 Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Unknown Product : transposase B Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 4690114 - 4690737 bp Length : 624 bp Strand : + Note : identified by match to protein family HMM PF00665 DNA sequence : ATGTGGAATCACAAAAGGATCCACCGTATTTATTGTCTGCTGAAGCTGAATTTTCGCCGTAAGGGCAAACAACGGCTGCC GGTGCGTAACCCTTCGCCACTGGCCACGCCGGAAGCGCTGAACCAGAGCTGGTCTGTTGATTTTATGCATGATGCCCTGG TCTGTGGGCGTCGTTTTCGCACGTTCAATGTCGTTGATGACTTTAACCGTGAGGCGTTGTCGATTGAAATAGATCTGAAT CTGCCAGCCCCACGAGTGGTCCGGGTGCTTGACAGGATCGCGGCAAACCGTGGCTATCCGGCCATGCTTCGCATGGATAA CGGCCCAGAATTTATCTCTCTGGCACTGACTGAATGGGCAGAGAAACATGCCGTAAAACTGGTGTTTATCCAGCCGGGTA AGCCGACACAAAATGCTTTCATTGAGCGTTTTAACAGGACATATCGCACAGAAATACTCGATTTTTATCTGTTCAGAACG CTGAATGAAGTACGTGAAATCACGGAAAAATGGTTATCAGAATATAACTGTGAACGCCCGCATGAATCGCTGAACAATAT GACACCGGAGGAATACCGACAGCACCATTATTTGGCCGGGAACTCAAAAAATGTATGGAACTAA Protein sequence : MWNHKRIHRIYCLLKLNFRRKGKQRLPVRNPSPLATPEALNQSWSVDFMHDALVCGRRFRTFNVVDDFNREALSIEIDLN LPAPRVVRVLDRIAANRGYPAMLRMDNGPEFISLALTEWAEKHAVKLVFIQPGKPTQNAFIERFNRTYRTEILDFYLFRT LNEVREITEKWLSEYNCERPHESLNNMTPEEYRQHHYLAGNSKNVWN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 2e-81 | 84 |
| unnamed | CAB46578.1 | IS1222-like transposase | Not tested | HPI | Protein | 2e-28 | 47 |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 1e-34 | 45 |
| RS13 | AAP82958.1 | putative transposase | Not tested | PAPI-2 | Protein | 6e-25 | 44 |
