Gene Information

Name : SeAg_B0046 (SeAg_B0046)
Accession : YP_002145022.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Unknown
Product : glycoside hydrolase, family 31
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1501
EC number : -
Position : 48369 - 50408 bp
Length : 2040 bp
Strand : -
Note : identified by match to protein family HMM PF01055

DNA sequence :
ATGCCATTTATGCAACAAGACCCGCGTCGTCTGGTCTGGCAGCAAAACGATCGCTATTTATGGATTGAACCCTGGGGCGA
GAACAGCCTGCGCGTACGCAGCGGCCGTCATCTGCCGGTAATGAGAAATGAAGACTGGGCATTGACTGAGCCAGTCGCAG
AAAGCCAGTGCCACATTGATTATGAGCACCACCAGGCAACGCTGACCAACGGCAAAATTATCGCTATCGTCAATCAAAAA
GGACAGGTTACATTTTACCGCCATCCACACAAACCCCTGTTGCAGGAGTTCTGGCGCCTGCGGGGCGAAATTGGCGAGGA
TGAATCATCTCACGGCCAGTACGTCAGCGCACTCAACCTTGAGGGACGCGAGTTCCGCCCTATTCAGGGTGGGAAATATT
CACTGAAAGCCCGCTTCGAAGCCACCGAAGGGGAAAAAATTTATGGCATGGGGCAGTATCAACAGGCCAACCTGGATCTC
AAAGGATGCGTGCTTGAGCTGGCGCAACGTAACTCCCAGGCCTCAGTACCGTTTATGCTCTCCAGTCTGGGCTACGGATT
TTTATGGAACAACCCGGCAGTCGGACGCGTAACCTTTGCCCAAAACGTTACCGAATGGGAAGCGCAGGTCAGCGAACAGT
TAGACTACTGGATCACGGCTGGCGATACCCCGGCAGAAATTAGCCGGGCTTACGCGCTGGCTACCGGCACGCCGCCGATG
ATGCCGGACTACGCCATGGGCTTCTGGCAGTGCAAACTCCGTTATCGTACACAGGAAGAGCTGCTGGAGGTCGCCCGCGA
ATATAAGCGCCGCAATCTGCCTATCTCAGTGATCGTAATCGACTTCTTTCACTGGCCGAATCAGGGTGACTGGATGTTCG
ATGCGCGCGACTGGCCCGATCCTGATGCCATGATTGCCGAGCTGAAATCGCTGGGAATTGAGCTGATGGTCTCCGTCTGG
CCGACGGTGGATAACCGTACCGAAAGCTATCGGGAGATGCGCGAAAACGGCTGGCTGGTACAAACGGAACGTGGCTTGCC
GATCAATATGGATTTCCTCGGCAATACCACTTACTTTGATGCGACTCATCCGGGCGCGCGCGACTACGTCTGGGGCAAAG
CCAAACGCAACTATTACGATAAAGGCGTGAAGTTATTCTGGTTAGATGAAGCCGAACCTGAGTTCAGCGTTTACGACTAC
GACAACTATCGCTACCATGCCGGGCCGGTACTGGAAGTGGGCAATATCTACCCACGTATGTACGCTAAAACCTTTTTTGA
CGGCATGAAAGCCGATGGCGAAGACCAGGTTATCAACCTGCTACGCTGCGCCTGGGCCGGCAGTCAGAAGTTCGGCGCAC
TGGTCTGGTCAGGGGATATTCACTCCTCGTTTAGATCGCTACGCAACCAGTTTGCCGCCGGACTCAATATGGGAATCGCG
GGGATACCGTGGTGGACGACGGATATCGGCGGTTTCCATGGCGGTAATATTCACGACCCGAAATTCCATGAATTGCTGAT
TCGCTGGTTCCAGTGGGGCGTCTTTAGTCCGGTGATGCGTCTGCACGGCAACCGCGATCCGCAAATTTTACCCGCGCAAC
CGTACCGGGATGGTATCGCCCAGTGCCCTACAGGTGCGCCGAACGAGGTCTGGAGCTACGGTGAGGAAGTATGCGAGGTA
CTGACAGGTTGCCTGGCGTTGCGAGAAAAACTCAAGCCCTATATCAAAGCGCTGATGGAGGAAACCCATAAGCACAATAC
GCCAGTGATGCGCCCCCTGTTCTTTGAATTCCCCGAACAGGAAACAAGTTGGGCAATCACCGACCAGTATTGTTTTGGTC
CTGACCTGCTGATCGCCCCCGTCATGCATGAAGGTATGCGCGAACGTGATATCTGGCTACCGGAAGGGGAAACATGGACG
GATCTTGCAACCGGTGAAAGCTATTCAGGAGGGCAGACGCTGCAGTACGCTACGCCACTGAACAGAATTCCGGTGTTTAT
CCGCGAAGGTGGGCAGTACCGTAGCCTACTGAACTTGTAG

Protein sequence :
MPFMQQDPRRLVWQQNDRYLWIEPWGENSLRVRSGRHLPVMRNEDWALTEPVAESQCHIDYEHHQATLTNGKIIAIVNQK
GQVTFYRHPHKPLLQEFWRLRGEIGEDESSHGQYVSALNLEGREFRPIQGGKYSLKARFEATEGEKIYGMGQYQQANLDL
KGCVLELAQRNSQASVPFMLSSLGYGFLWNNPAVGRVTFAQNVTEWEAQVSEQLDYWITAGDTPAEISRAYALATGTPPM
MPDYAMGFWQCKLRYRTQEELLEVAREYKRRNLPISVIVIDFFHWPNQGDWMFDARDWPDPDAMIAELKSLGIELMVSVW
PTVDNRTESYREMRENGWLVQTERGLPINMDFLGNTTYFDATHPGARDYVWGKAKRNYYDKGVKLFWLDEAEPEFSVYDY
DNYRYHAGPVLEVGNIYPRMYAKTFFDGMKADGEDQVINLLRCAWAGSQKFGALVWSGDIHSSFRSLRNQFAAGLNMGIA
GIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQILPAQPYRDGIAQCPTGAPNEVWSYGEEVCEV
LTGCLALREKLKPYIKALMEETHKHNTPVMRPLFFEFPEQETSWAITDQYCFGPDLLIAPVMHEGMRERDIWLPEGETWT
DLATGESYSGGQTLQYATPLNRIPVFIREGGQYRSLLNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0077 AAM75281.1 EF0077 Not tested Not named Protein 3e-157 45
EF0551 NP_814321.1 glycosyl hydrolase Not tested Not named Protein 5e-157 45