|
Name : ribD (SeAg_B0455) Accession : YP_002145398.1 Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Unknown Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 451373 - 452476 bp Length : 1104 bp Strand : + Note : 'riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine DNA sequence : ATGCAGGATGAGTTTTACATGGCGCGAGCGCTAAAACTGGCGCAGCGTGGACGTTTCACCACTCACCCGAACCCTAATGT CGGCTGTGTCATTGTTAACAATGGCGACATCGTCGGCGAAGGTTATCACCAGCGCGCCGGAGACCCGCACGCCGAGGTTC ATGCGCTGCGGATGGCGGGCGCAAAAGCCAAAGGCGCAACCGCCTATGTCACGCTTGAACCCTGTAGCCATCATGGGCGA ACGCCGCCATGTTGCGATGCGCTGATTGCGGCCGGCGTCGCGCGCGTGGTCGCCGCGATGCAGGACCCGAACCCACAGGT CGCCGGGCGCGGGCTGTATCGCCTGCAACAGGCGGGTATTGCGGTCAGCCACGGGTTAATGATGAGTGAAGCGGAGGCGC TCAATAAAGGCTTCCTCAAGCGGATGCGTACCGGATTCCCTTATCTTCAGCTTAAACTGGGCACCTCCGTGGATGGACGG ACGGCGATGGCCAGCGGCGAAAGCCAGTGGATCACCTCGCCGCAGGCCCGGCGCGACGTTCAGCGCTTGCGTGCGCAAAG TCACGCTATCTTAACCAGTAGCGCGACGGTATTGGCTGACGATCCGGCCTTGACGGTGCGTTGGGCGGAGTTAGATGCCT CTACGCAGGCGTCTTACCCGCAGGAAAATCTGCGCCAGCCGGTGCGAATTGTTATCGACAGCCAAAACCGGGTAACGCCT GCGCATCGTATTGTGCAGCAGCCTGGCGAAACGTGGATTGCGCGTACCCAGGAAGATAGCCGCGCGTGGCCCGATGCGGT TCGTACTATCAGCGTGCCGGCGCACAACGGACATTTGGATCTGGTTGTACTAATGATGCAGTTAGGCAGGCAGCAGATTA ATAGCATATGGGTTGAAGCCGGACCGGGACTGGCAGGCGCGTTGTTGCAAGCCGGGCTGGTGGATGAACTGATTGTCTAT GTCGCGCCTAAATTGTTGGGAACCCAGGCGCGGGGATTATGCGAATTGCCGGGGCTTGAGAAGCTCGCCGACGCGCCGCA ATTTACCTTCAGCGAAATACGTCATGTCGGCCCGGATGTTTGCCTGCATATGGTGAGCGCATGA Protein sequence : MQDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHQRAGDPHAEVHALRMAGAKAKGATAYVTLEPCSHHGR TPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIAVSHGLMMSEAEALNKGFLKRMRTGFPYLQLKLGTSVDGR TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWAELDASTQASYPQENLRQPVRIVIDSQNRVTP AHRIVQQPGETWIARTQEDSRAWPDAVRTISVPAHNGHLDLVVLMMQLGRQQINSIWVEAGPGLAGALLQAGLVDELIVY VAPKLLGTQARGLCELPGLEKLADAPQFTFSEIRHVGPDVCLHMVSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 3e-57 | 45 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 3e-57 | 45 |
