Gene Information

Name : SeAg_B4020 (SeAg_B4020)
Accession : YP_002148730.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Unknown
Product : deoxyribose operon repressor
Function : -
COG functional category : K : Transcription
COG ID : COG1349
EC number : -
Position : 3919337 - 3920122 bp
Length : 786 bp
Strand : +
Note : identified by match to protein family HMM PF00455; match to protein family HMM PF08220

DNA sequence :
ATGGAGACCAAGCAAAAAGAACGTATCCGACGCTTGATGGAGTTACTGAAAAAGACCGATCGAATCCATCTGAAAGACGC
CGCGCGGATGCTGGAAGTTTCGGTGATGACCATTCGCCGCGATCTCAGCCAGGATGATGACCCTTTACCGCTGACGCTGC
TCGGCGGCTATATCGTCATGGTAAATAAGCCTACGTCTTCAACCAATATGCCGCTGCCGGCGAAAAAGACGCATCATAGG
GACGACCTTCCCGTTGCGATCCTGGCCGCCGGCCTGGTGCGTGAAAACGATTTGGTTTTTTTTGATAACGGTCCGGAAAT
GCCATTAGTTATCAGCATGATACCGGATGATATTACCTTTACCGGGATTTGCTACTCGCATCGGGTATTTATCGCGCTGA
ATGAAAAGCCTAATGCCACGGCGATTTTGTGCGGCGGCACCTATCGGGCCAAGAGCGATGCCTTTTATGATGCCAATAAT
CCTTCGGCGCTGGATTCGCTCAATCCGCGCAAAGTGTTTATTTCCGCCAGCGGCGTACATGAACATTTTGGCGTGAGCTG
GTTTAACCCGGATGATCTTGCCGCCAAACGTAAAGCGATGGAGCGCGGTCTGCGCAAAATTTTGCTGGCGCGTCACGCCC
TGTTTGATGAGGTCGCGCCTGCCAGCATTGGTCCGCTTTCTGCCTTTGATGTCCTGATTAGCGATCGCCCATTACCGACA
GATTATGCCGCTCACTGTCGGAATGGTTCCGTCAAAGTCATCACGCCTGATTCGGAAAGTGAATAA

Protein sequence :
METKQKERIRRLMELLKKTDRIHLKDAARMLEVSVMTIRRDLSQDDDPLPLTLLGGYIVMVNKPTSSTNMPLPAKKTHHR
DDLPVAILAAGLVRENDLVFFDNGPEMPLVISMIPDDITFTGICYSHRVFIALNEKPNATAILCGGTYRAKSDAFYDANN
PSALDSLNPRKVFISASGVHEHFGVSWFNPDDLAAKRKAMERGLRKILLARHALFDEVAPASIGPLSAFDVLISDRPLPT
DYAAHCRNGSVKVITPDSESE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85174.1 hypothetical protein Not tested PAI V 536 Protein 5e-99 83
deoQ ADD91721.1 putative transcriptional regulator DeoQ Not tested PAI-I AL862 Protein 5e-99 82