Gene Information

Name : rph (SeAg_B3951)
Accession : YP_002148665.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 3846046 - 3846762 bp
Length : 717 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGTCCAGCAGGCCGTAGCGCTAATCAGGTGCGTCCCGTAACCCTGACCCGTAACTATACAAAACACGCTGAAGGCTC
GGTACTGGTCGAATTTGGAGATACCAAAGTGTTGTGCACCGCCTCCATTGAAGAAGGCGTTCCACGTTTTCTGAAAGGGC
AAGGCCAGGGGTGGATCACCGCAGAGTATGGCATGTTGCCTCGCGCTACCCATACCCGTAACGCGCGCGAAGCGGCAAAG
GGTAAGCAGGGCGGCCGTACTATGGAAATTCAGCGTTTGATCGCGCGTGCGCTGCGTGCGGCGGTCGATCTGAAAACGCT
CGGCGAATTTACCATTACGCTGGACTGCGATGTAATCCAGGCCGATGGCGGTACGCGTACAGCGTCTATTACCGGTGCCT
GCGTGGCGTTGGCGGATGCGCTGAATAAATTGGTTGCCAACGGTAAGCTGAAAACCAACCCGATGAAAGGCATGGTGGCG
GCGGTTTCCGTAGGCATCGTTAACGGCGAAGCGATCTGCGATCTGGAATATGTTGAAGATTCCGCCGCAGAAACCGACAT
GAACGTCGTGATGACTGAAGATGGCCGCATTATTGAAGTTCAGGGTACCGCGGAAGGCGAGCCGTTCAGCCATGAAGAAC
TTCTCACTTTGTTGGCGCTGGCCCGAGGGGGAATTGAATCCATTGTGGCGACGCAGAAGGCGGCGTTAGAAAATTGA

Protein sequence :
MRPAGRSANQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWITAEYGMLPRATHTRNAREAAK
GKQGGRTMEIQRLIARALRAAVDLKTLGEFTITLDCDVIQADGGTRTASITGACVALADALNKLVANGKLKTNPMKGMVA
AVSVGIVNGEAICDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFSHEELLTLLALARGGIESIVATQKAALEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-57 59