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Name : SeAg_B3851 (SeAg_B3851) Accession : YP_002148567.1 Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Virulence Product : outer membrane usher protein FimD Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 3741510 - 3744038 bp Length : 2529 bp Strand : - Note : identified by match to protein family HMM PF00577 DNA sequence : ATGACATGGACGCATCTTCCTCTGGGCAATAAGACCTCGCGTTTCACGCAGTCTGCGCTTGCGCTGATGATAGCGAGTAC GCTCCCCGCGTATGCGGGAACATTTAACCCGCGCTTTCTGGAGGATGTGCCGGGTATTGATCAGCACGTTGACCTTTCAA TGTATGAATCCAATAAAGCTGAACACCTGCCAGGTAAATACCGCGTCTCGGTGGTGGTCAACGAAAAAAAAATGGAGTCT CGCACCCTGGAGTTTAAGGCAGCGACAGAGGCGCAGCGCGCAAAAATGGGTGAATCCCTGGTGCCGTGCTTAAGCCGCGT GCAGCTTGAAGATATGGGCGTGCGTATTGATAGCTTCCCGGCGCTGAAAATGGCCCCGCCTGAAGCCTGTGTTGCTTTTG ACGACATTATTCCCCAGGCCGCCAGCCATTTCGACTTTGCAGACCAGACCCTGATCATGAGCTTCCCGCAGGCTGCGATG AAGCAGACAGCGCGCGGTACGGTGCCAGAATCGCAGTGGGACGAAGGGGTGAATGCCCTGCTGGTGGATTATAACTTCTC CGGCAGCAACGCCAGCTATGACGCGCACGACAGTGAGACCAACTACAACAGCGACAGCTACTATCTGAACCTGCGCAGCG GTATGAACCTGGGGGCATGGCGATTACGTAACTATAGTACCTGGACGCGAAACGACGGTAACAACACATGGGATAACATT GGCACATCCCTAAGCCGTGCCATTGTGCCGCTGAAATCACAGCTGACGTTGGGGGATACCTCCACCGCCGGTGATATTTT TGACAGCGTTCAGATGCGCGGGGTGCAGTTAACTTCTGACGAAGAGATGCTGCCTGACAGCCAGCGCGGGTTTGCGCCCG TCATCCGGGGTATTGCCAAAAGTAACGCCGAAGTCACCGTTGAGCAGAACAACTACGTTATTTACCGTACGTTTGTTCAG CCGGGTGCGTTTGAAATTAACGACCTGTATCCAACCTCAAACAGCGGCGACCTGACGGTCACCATTAAAGAATCGGACGG CAGTGAGCAGAAGTTCGTTCAGCCGTTCTCCTCGGTGGCGCTCCTCCAGCGTGAAGGCCATCTCAAGTACAGCCTTTCCG CCGGGGAATACCGTGCCGGGAACTATAACAGCGCCGAGCCGAAATTCGGGCAGCTTGATGCCATGTACGGCCTGCCGTAT GGCTTTACCGTTTATGGTGGTGCGATCTTCTCTGACGACTATTACTCGCTGGCGGGAGGATTAGGTAAAAACTTCGGTTA TATCGGCGCGATCTCCATCGATGTAACCCAGGCAAAAAGCAAGCTGGCAAATGAGGAGAATTCGGAAGGTCAGTCTTATC GTTTCCTCTACTCCAAGAGCTTTAACAGCGGTACCGATTTCCGTCTGCTGGGTTACAAGTATTCGACCAGCGGCTATTAC ACCTTCCAGGAAGCGACGGATGTGCGCAGCGATGCGGACAGCTCTTATAGCCAGTATCACAAACGTAGTCAGATTCAGGG CAACGTAACGCAGCAACTGGGCGCCTGGGGCTCGGTCTATTTTAACGTCACGCAGCAGGACTACTGGAATGATGAAGGTA AACAGCGTTCGCTGAATGCCGGTTATAACGGCCGTATTGGCCGCGTGAACTACAGCATTGCTTACACCTGGACGAAAAGC CCCGAGTGGGATGAGAGCGATCGTTTACTGTCATTCTCCATGTCGATTCCACTGGGACGCGTGTGGAGTAACTACCACCT CACGACCGATCAGCATGGCCGAACCAACCAGCAGTTGGGTGTGAGCGGCACCGCGCTGGAAGACCACAACCTGAACTATA GCGTACAGGAAGGCTACGGCAGCAACGGCGTGGGTAACAGCGGCAGCGTGAACCTGGATTACCAGGGCGGCGTGGGTAGC GCCAGCCTGGGTTACAACTACAACCGTGACGGCCAGCAGGTGAACTACGGTTTGCGCGGCGGTGTGATAGCCCATAGCGA AGGCATCACTCTTTCTCAACCTCTGGGTGAATCTATGGCCATTATCTCCGCGCCGGGCGCGCGCGGCGCGCACGTGATCA ACAACGGTGGTGTGGAAGTGGACTGGATGGGTAATGCGGTCGTGCCTTATCTCACTCCGTACCGTGAAACGGAAGTCTCA CTGCGAAGCGACAGCCTGAACAACCAGGTTGACCTGGATACCGCCTCCGTCAACGTAGTGCCGACGCGCGGCGCGATTGT TCGTGCCCGCTTCGATACCCGAGTGGGCTATCGCGTGCTGATGAACCTGACGCAGGCCAATGGCAAAGCGGTGCCGTTTG GTGCTACCGCCACGCTGCTGGATACCACAAAAGAGTCCAGCAGTATCGTGGGTGAAGACGGTCAGCTTTATATCAGCGGG ATGCCGGAGAAAGGTGCCCTTCAGGTGAACTGGGGTAAAGACCAGGCACAGCAATGCCGCGTGGCGTTTACGCTGCCGGA ACAACAGGATAATACCGGCGTGGTGATGGCGAATGCCGTCTGCCGGTAA Protein sequence : MTWTHLPLGNKTSRFTQSALALMIASTLPAYAGTFNPRFLEDVPGIDQHVDLSMYESNKAEHLPGKYRVSVVVNEKKMES RTLEFKAATEAQRAKMGESLVPCLSRVQLEDMGVRIDSFPALKMAPPEACVAFDDIIPQAASHFDFADQTLIMSFPQAAM KQTARGTVPESQWDEGVNALLVDYNFSGSNASYDAHDSETNYNSDSYYLNLRSGMNLGAWRLRNYSTWTRNDGNNTWDNI GTSLSRAIVPLKSQLTLGDTSTAGDIFDSVQMRGVQLTSDEEMLPDSQRGFAPVIRGIAKSNAEVTVEQNNYVIYRTFVQ PGAFEINDLYPTSNSGDLTVTIKESDGSEQKFVQPFSSVALLQREGHLKYSLSAGEYRAGNYNSAEPKFGQLDAMYGLPY GFTVYGGAIFSDDYYSLAGGLGKNFGYIGAISIDVTQAKSKLANEENSEGQSYRFLYSKSFNSGTDFRLLGYKYSTSGYY TFQEATDVRSDADSSYSQYHKRSQIQGNVTQQLGAWGSVYFNVTQQDYWNDEGKQRSLNAGYNGRIGRVNYSIAYTWTKS PEWDESDRLLSFSMSIPLGRVWSNYHLTTDQHGRTNQQLGVSGTALEDHNLNYSVQEGYGSNGVGNSGSVNLDYQGGVGS ASLGYNYNRDGQQVNYGLRGGVIAHSEGITLSQPLGESMAIISAPGARGAHVINNGGVEVDWMGNAVVPYLTPYRETEVS LRSDSLNNQVDLDTASVNVVPTRGAIVRARFDTRVGYRVLMNLTQANGKAVPFGATATLLDTTKESSSIVGEDGQLYISG MPEKGALQVNWGKDQAQQCRVAFTLPEQQDNTGVVMANAVCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 4e-166 | 45 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 2e-168 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeAg_B3851 | YP_002148567.1 | outer membrane usher protein FimD | VFG0454 | Protein | 0.0 | 99 |
| SeAg_B3851 | YP_002148567.1 | outer membrane usher protein FimD | VFG0876 | Protein | 7e-169 | 45 |
| SeAg_B3851 | YP_002148567.1 | outer membrane usher protein FimD | VFG1645 | Protein | 1e-168 | 41 |
| SeAg_B3851 | YP_002148567.1 | outer membrane usher protein FimD | VFG0446 | Protein | 1e-153 | 41 |
| SeAg_B3851 | YP_002148567.1 | outer membrane usher protein FimD | VFG0912 | Protein | 1e-167 | 41 |
