Gene Information

Name : SeAg_B0359 (SeAg_B0359)
Accession : YP_002145306.2
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Unknown
Product : ISEc16, orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 351909 - 352772 bp
Length : 864 bp
Strand : -
Note : identified by match to protein family HMM PF00665

DNA sequence :
ATGTTGGCTTCCACACCACCGACTTCAACTGGGGTATTTAACCGGGCGCTTAGCTCGCTGGCGATAGCCTGCATCTGTAA
GCGGTACGTCTGGCATCAGCGTCGTCATCAGATAAACCGGCGTCAGCGGTTCCGCCTTGTCTGTGATAACGTCGTCCGGG
AAGCATTCAGTGACGCAAAACAACGCTATGGTGCGCCACGCCTGACGGATGAGCTTCGTGCTCAGGGTTACCAGTTCAAC
GTGAAAACCGTGGCGGCCAGCCTGCGTCGGCAGGGGCTGCGGGCGAAAGCCTCGCGCCGGTTCCGTCCGGTCAGTTACCG
CAAACATGGTCTGCCAGTCTCAGAGAATCTGCTGAAGCAGGACTTTTACGCCAGCGGCCCGAATCAGAAGTGGGTGGATG
ACATCACGTATCTTCGCACTGGTGAAGGCTGGCTTTATCTGGCCGTGGTTATCGATCTGTGGTCGCGGTCAGTCATTGGC
TGGTCGATGTCTTCGCGGATGACAGCACAGCTTGCCTGCGATGCGTTACAGATGGCGCTGTGGCGGCGTAAATGTCCGGA
AAATGTCATCGTGCATACAGACAGAGGCGGTCAGTACTGTTCAACGGATTATCAGAGCTTACTGAAACGCCATAATCTGC
GGGGAAGTATGAGCGCCAGAGGTTGTTGTTACGACAATGCCTGTGCGGAAAGCTTCTTCCATACGCTGAAGGTGGAATGT
ATCCACGGAGAGGACTTTGTCAGCCGGGAAATAATGCGGACAGCAGTGTTTAATTATATTGAGTGTGATTACAATCGGTG
GCGTCGTCACAGTGCCTGTGGCGGTCTCAGTCCGGAACAATTTGAAAACCAGAACCTCGCTTAG

Protein sequence :
MLASTPPTSTGVFNRALSSLAIACICKRYVWHQRRHQINRRQRFRLVCDNVVREAFSDAKQRYGAPRLTDELRAQGYQFN
VKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVDDITYLRTGEGWLYLAVVIDLWSRSVIG
WSMSSRMTAQLACDALQMALWRRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVEC
IHGEDFVSREIMRTAVFNYIECDYNRWRRHSACGGLSPEQFENQNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 4e-99 88
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-99 88
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-98 88
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 4e-95 82
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-41 48
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 6e-41 48
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-41 48
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 3e-39 43
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 3e-39 43
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 4e-39 42
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 3e-39 42
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-39 42
unnamed AAF09022.1 unknown Not tested SHI-O Protein 2e-39 42
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-39 42
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 4e-39 42
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeAg_B0359 YP_002145306.2 ISEc16, orfB VFG1631 Protein 2e-95 82
SeAg_B0359 YP_002145306.2 ISEc16, orfB VFG1706 Protein 2e-39 42