|
Name : SeAg_B0359 (SeAg_B0359) Accession : YP_002145306.2 Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Unknown Product : ISEc16, orfB Function : - COG functional category : - COG ID : - EC number : - Position : 351909 - 352772 bp Length : 864 bp Strand : - Note : identified by match to protein family HMM PF00665 DNA sequence : ATGTTGGCTTCCACACCACCGACTTCAACTGGGGTATTTAACCGGGCGCTTAGCTCGCTGGCGATAGCCTGCATCTGTAA GCGGTACGTCTGGCATCAGCGTCGTCATCAGATAAACCGGCGTCAGCGGTTCCGCCTTGTCTGTGATAACGTCGTCCGGG AAGCATTCAGTGACGCAAAACAACGCTATGGTGCGCCACGCCTGACGGATGAGCTTCGTGCTCAGGGTTACCAGTTCAAC GTGAAAACCGTGGCGGCCAGCCTGCGTCGGCAGGGGCTGCGGGCGAAAGCCTCGCGCCGGTTCCGTCCGGTCAGTTACCG CAAACATGGTCTGCCAGTCTCAGAGAATCTGCTGAAGCAGGACTTTTACGCCAGCGGCCCGAATCAGAAGTGGGTGGATG ACATCACGTATCTTCGCACTGGTGAAGGCTGGCTTTATCTGGCCGTGGTTATCGATCTGTGGTCGCGGTCAGTCATTGGC TGGTCGATGTCTTCGCGGATGACAGCACAGCTTGCCTGCGATGCGTTACAGATGGCGCTGTGGCGGCGTAAATGTCCGGA AAATGTCATCGTGCATACAGACAGAGGCGGTCAGTACTGTTCAACGGATTATCAGAGCTTACTGAAACGCCATAATCTGC GGGGAAGTATGAGCGCCAGAGGTTGTTGTTACGACAATGCCTGTGCGGAAAGCTTCTTCCATACGCTGAAGGTGGAATGT ATCCACGGAGAGGACTTTGTCAGCCGGGAAATAATGCGGACAGCAGTGTTTAATTATATTGAGTGTGATTACAATCGGTG GCGTCGTCACAGTGCCTGTGGCGGTCTCAGTCCGGAACAATTTGAAAACCAGAACCTCGCTTAG Protein sequence : MLASTPPTSTGVFNRALSSLAIACICKRYVWHQRRHQINRRQRFRLVCDNVVREAFSDAKQRYGAPRLTDELRAQGYQFN VKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVDDITYLRTGEGWLYLAVVIDLWSRSVIG WSMSSRMTAQLACDALQMALWRRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVEC IHGEDFVSREIMRTAVFNYIECDYNRWRRHSACGGLSPEQFENQNLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 2e-98 | 88 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 4e-99 | 88 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 2e-99 | 88 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 4e-95 | 82 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 6e-41 | 48 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 6e-41 | 48 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 6e-41 | 48 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 3e-39 | 43 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 3e-39 | 43 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 4e-39 | 42 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 3e-39 | 42 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 2e-39 | 42 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 2e-39 | 42 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 2e-39 | 42 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 4e-39 | 42 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 2e-39 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeAg_B0359 | YP_002145306.2 | ISEc16, orfB | VFG1631 | Protein | 2e-95 | 82 |
| SeAg_B0359 | YP_002145306.2 | ISEc16, orfB | VFG1706 | Protein | 2e-39 | 42 |
