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Name : SeAg_B0331 (SeAg_B0331) Accession : YP_002145281.1 Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Virulence Product : outer-membrane fimbrial usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 324863 - 327373 bp Length : 2511 bp Strand : + Note : identified by match to protein family HMM PF00577 DNA sequence : ATGAAGTTCAAACAACCTGCCTTGCTACTGTTCATCGCGGGAGTGGTTCATTGCGCAAATGCGCACGCTTACACATTCGA TGCATCAATGTTGGGCGATGCAGCGAAAGGGGTTGATATGTCGCTCTTTAACCAGGGGGTACAACAGCCAGGGACTTATC GCGTGGACGTGATGGTGAATGGTAAACGTGTCGACACCCGTGATGTGGTGTTCAAATTGGAAAAGGATGGGCAAGGAACG CCTTTTCTGGCTCCTTGTTTGACGGTCAGTCAGCTTTCACGCTACGGCGTAAAAACGGAAGATTACCCTCAGTTGTGGAA AGCAGCAAAGACCCCAGATGAGTGTGCGGATCTGAGCGCCATTCCACAGGCTAAAGCGGTACTGGATATCAATAATCAGC AACTGCAACTGAGTATTCCTCAGGTGGCGTTGCGTACGAAATTTAAGGGGATCGCTCCTGAAGATCTCTGGGATGATGGT ATTCCGGCGTTTCTGATGAACTACAGTGCGAGGACAACGCAGACGGATTACAAAATGGATATGGAGAGGCGTGACAACTC TTCCTGGGTACAACTGCAACCGGGAATCAATATAGGTGCGTGGCGTGTCCGCAATGCGACCAGCTGGCAGCGGAGTGGTC AACAGTCGGGGAAGTGGCAGGCAGCATATACCTATGCTGAGCGTGGACTGTACTCACTAAAAAGTCGTCTGACTCTGGGG CAAAAGACTTCGCAGGGGGAGATATTTGATAGTGTGCCATTTACCGGTGTGATGTTGGCATCGGATGACAACATGGTGCC CTACAGTGAGCGGCAGTTTGCTCCGGTAGTGCGTGGGATTGCCCGCACGCAGGCTCGGGTGGAGGTCAAACAGAATGGTT ACACCATTTACAACACCACCGTGGCGCCCGGACCGTTTGCACTGCGGGATCTGTCGGTAGCAGACAGTAGTGGTGATCTG CATGTCACCGTGTGGGAGGCCGATGGCAGTACACAAATGTTTGTGGTGCCGTATCAGACCCCGGCGATAGCACTGCACCA GGGATATTTGAAGTACAGCCTGTTGGCGGGCCGATACCGATCGTCAGACTCTGCAACGGATAAGGCGCAGATCGCGCAGG CTACGTTGATGTATGGTCTGCCGTGGAACCTCACTGCATACGGCGGTATACAGAGTGCAACGCACTATCAAGCTGCATCG CTTGGTTTGGGGGGATCTCTCGGGCGGTGGGGGAGTTTATCTGTCGATGGAAGCGACACACACAGTCAGCGTCAGGGGGA GGCGGTACAGCAAGGAGCCTCCTGGCGACTGCGTTACAGCAACCAGCTGACTGCGACGGGGACAAATTTTTTTCTGACGA GATGGCAGTATGCCTCGCAGGGCTATAACACCCTATCCGATGTGCTCGACAGTTATCGACATAATGGCAACCGTCTATGG TCGTGGCGGGAAAATTTGCAGCCGAGCTCGCGTACTACCCTGATGTTGAGTCAGTCATGGGGGAGGCATTTGGGCAATCT GAGTTTAACCGGTTCCCGTACCGACTGGCGTAATCGCCCCGGTCATGATGACAGCTACGGACTGAGTTGGGGAACCTCTA TCGGAGGGGGCTCGCTGTCATTGAACTGGAATCAAAACAGGACGCTGTGGCGCAATGGCGCGCACCGTAAAGAGAACATA ACCAGCCTGTGGTTCAGTATGCCATTAAGCCGCTGGACGGGGAATAATGTAAGTGCTAGTTGGCAGATGACTTCACCATC ACACGGTGGTCAGACGCAACAAGTGGGGGTCAACGGAGAGGCATTCAGTCAGCAACTGGATTGGGAGGTGCGTCAGAGTT ACCGTGCCGATGCCCCGCCAGGTGGTGGTAATAACAGCGCATTGCACTTGGCATGGAATGGGGCTTACGGCCTGTTAGGT GGTGACTATAGCTACAGCCGGGCGATGCGCCAGATGGGAGTCAATATCGCGGGAGGTATAGTTATCCACCATCATGGTGT GACGCTGGGGCAACCTTTGCAAGGCTCAGTGGCGCTGGTTGAAGCGCCAGGGGCCTCGGGGGTGCCAGTTGGCGGCTGGC CTGGCGTTAAGACGGATTTTCGTGGCGACACCACAGTGGGCAACCTGAACGTCTATCAGGAGAATACAGTCAGCCTCGAT CCGTCGCGACTACCGGATGACGCAGAGGTCACACAAACCGATGTGCGCGTGGTGCCAACCGAAGGGGCGGTGGTGGAAGC GAAGTTTCACACTCACATCGGGGCCAGGGCACTGATGACGCTGAAACGGGAAGATGGTAGCGCCATTCCTTTCGGGGCGC AGGTTACAGTCAATGGGCAGGATGGCAGTGCTGCTCTGGTGGATACTGATAGCCAGGTTTATCTCACTGGTTTGGCGGAT AAGGGCGAACTGACGGTGAAATGGGGAGCACAGCAATGTCGGGTTAACTACCAGCTACCTGCCCACAAGGGAATCGCGGG CTTGTATCAAATGAGCGGTCTCTGCAGATAG Protein sequence : MKFKQPALLLFIAGVVHCANAHAYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRVDTRDVVFKLEKDGQGT PFLAPCLTVSQLSRYGVKTEDYPQLWKAAKTPDECADLSAIPQAKAVLDINNQQLQLSIPQVALRTKFKGIAPEDLWDDG IPAFLMNYSARTTQTDYKMDMERRDNSSWVQLQPGINIGAWRVRNATSWQRSGQQSGKWQAAYTYAERGLYSLKSRLTLG QKTSQGEIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPFALRDLSVADSSGDL HVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSATDKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAS LGLGGSLGRWGSLSVDGSDTHSQRQGEAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRHNGNRLW SWRENLQPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQNRTLWRNGAHRKENI TSLWFSMPLSRWTGNNVSASWQMTSPSHGGQTQQVGVNGEAFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGAYGLLG GDYSYSRAMRQMGVNIAGGIVIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLNVYQENTVSLD PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTHIGARALMTLKREDGSAIPFGAQVTVNGQDGSAALVDTDSQVYLTGLAD KGELTVKWGAQQCRVNYQLPAHKGIAGLYQMSGLCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 0.0 | 98 |
| afaC | ADD91743.1 | putative AfaC-VIII usher protein | Not tested | PAI-I AL862 | Protein | 0.0 | 50 |
| afaC | AAD44022.2 | AfaC | Virulence | PAI-I AL862 | Protein | 0.0 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeAg_B0331 | YP_002145281.1 | outer-membrane fimbrial usher protein | VFG0853 | Protein | 0.0 | 50 |
| SeAg_B0331 | YP_002145281.1 | outer-membrane fimbrial usher protein | VFG0944 | Protein | 0.0 | 50 |
| SeAg_B0331 | YP_002145281.1 | outer-membrane fimbrial usher protein | VFG0849 | Protein | 1e-179 | 46 |
| SeAg_B0331 | YP_002145281.1 | outer-membrane fimbrial usher protein | VFG0857 | Protein | 6e-176 | 45 |
| SeAg_B0331 | YP_002145281.1 | outer-membrane fimbrial usher protein | VFG0419 | Protein | 3e-170 | 44 |
