Gene Information

Name : SeAg_B0330 (SeAg_B0330)
Accession : YP_002145280.2
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Virulence
Product : pili assembly chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 324126 - 324839 bp
Length : 714 bp
Strand : +
Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence : 
ATGGCGGTAGCTTTGTTCGCCTCTAATTCTATGGTTTCAGTATATGCCGCCAGGCAGCAATTAAATTCAGCCACTAAATC
ATTCAGCGTGAAGCTGGGAGCTACACGGGTGATTTATCACGCTGGTACACCCGGCGCGACGCTCTCGGTGAGCAACCCGC
AGGATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGAAGACAAAAATTCGCCAGCCCCCTTTATGGTGATGCCGCCT
CTATTTCGTTTAGAAGCGAACCAGCAGAGTCAACTGCGTATTATCCGTACTGGTGGTGACATGCCAACGGATCGTGAAAC
TTTACAGTGGGTCTGTATAAAGGCGCTACCACCCGAAAATGAACCGTCGGATACACAGGCTAAGGGCGCGACCCTTGACC
TCAATTTGTCCATCAGCACCTGTGACAAGCTGATTTTCCGCCCGGATGCCGTGAAGGGGACGCCGGAAGATGTTGCAGGA
AATTTAAGATGGGTGGAGACGGGCAACAAACTTAAGGTAGAGAACCCCACCCCGTTTTACATGAATTTAGCCTCTGTCAC
AGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATATCCCCCCCTTTGCTGACAAAACACTAAATATGCCAGGTGGCACTC
GTGGTGATGTCGAGTGGAAAATTATTACAGACTTAGGTGGTGAAAGTCATCCGTTCCACTACGTTTTTAAATAA

Protein sequence : 
MAVALFASNSMVSVYAARQQLNSATKSFSVKLGATRVIYHAGTPGATLSVSNPQDYPILVQSSVKAEDKNSPAPFMVMPP
LFRLEANQQSQLRIIRTGGDMPTDRETLQWVCIKALPPENEPSDTQAKGATLDLNLSISTCDKLIFRPDAVKGTPEDVAG
NLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYIPPFADKTLNMPGGTRGDVEWKIITDLGGESHPFHYVFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 5e-99 88
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 2e-54 50
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 2e-54 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeAg_B0330 YP_002145280.2 pili assembly chaperone VFG0943 Protein 1e-53 52
SeAg_B0330 YP_002145280.2 pili assembly chaperone VFG0858 Protein 1e-52 51
SeAg_B0330 YP_002145280.2 pili assembly chaperone VFG0850 Protein 2e-55 49
SeAg_B0330 YP_002145280.2 pili assembly chaperone VFG0852 Protein 1e-53 48
SeAg_B0330 YP_002145280.2 pili assembly chaperone VFG0420 Protein 1e-43 41