Gene Information

Name : SeAg_B3015 (SeAg_B3015)
Accession : YP_002147790.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein spaM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2944782 - 2945225 bp
Length : 444 bp
Strand : -
Note : identified by match to protein family HMM PF02090

DNA sequence :
ATGCATTCGCTGACCAGAATTAAAGTATTGCAGCGGCGCTGTACGGTATTTCATTCACAGTGTGAGTCGATATTACTTCG
CTATCAGGATGAGGACCGCGGGCTGCAGGCCGAGGAGGAGGCGCTCCTTGAACAAATAGCGGGTCTGAAATTGTTATTAG
ATACGCTGCGTGCAGAAAACAGACAGCTCAGTCGTGAGGAAATTTATACGTTATTACGTAAGCAGTCTATTGTTCGCCGG
CAGATAAAAGATTTAGAACTCCAGATTATACAAATTCAGGAAAAACGGAGCGAGCTGGAAAAGAAAAGGGAAGAGTTTCA
GAAAAAAAGTAAATATTGGTTGCGCAAAGAAGGGAACTATCAACGCTGGATAATCCGTCAGAAAAGACACTACATCCAGC
GAGAGATACAGCAGGAAGAGGCCGAGTCAGAGGAGATAATTTAA

Protein sequence :
MHSLTRIKVLQRRCTVFHSQCESILLRYQDEDRGLQAEEEALLEQIAGLKLLLDTLRAENRQLSREEIYTLLRKQSIVRR
QIKDLELQIIQIQEKRSELEKKREEFQKKSKYWLRKEGNYQRWIIRQKRHYIQREIQQEEAESEEII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invI NP_461814.1 needle complex assembly protein Virulence SPI-1 Protein 1e-39 99
spaM NP_457287.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 1e-40 99
spaM NP_806496.1 virulence-associated secretory protein Virulence SPI-1 Protein 1e-40 99
invI YP_217812.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 1e-39 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeAg_B3015 YP_002147790.1 surface presentation of antigens protein spaM VFG0554 Protein 3e-40 99