Gene Information

Name : epaR (SeAg_B3010)
Accession : YP_002147785.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Virulence
Product : type III secretion apparatus protein SpaR/YscT/HrcT
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 2941116 - 2941907 bp
Length : 792 bp
Strand : -
Note : identified by match to protein family HMM PF01311; match to protein family HMM TIGR01401

DNA sequence :
ATGTTTTACGCGTTGTACTTTGAAATTCATCACCTGGTTGCGTCTGCGGCGCTAGGGTTTGCTCGCGTGGCGCCGATTTT
TTTCTTCCTACCGTTTTTGAATAGCGGGGTATTAAGCGGTGCGCCGAGAAACGCCATTATCATCCTGGTGGCATTGGGAG
TATGGCCGCATGCATTGAACGAGGCGCCGCCGTTTTTATCGGTGGCGATGATCCCGTTAGTTCTGCAAGAAGCGGCGGTA
GGCGTCATGCTGGGCTGTCTGCTGTCATGGCCTTTTTGGGTTATGCATGCGCTGGGTTGTATTATCGATAACCAGCGAGG
GGCAACGCTAAGTAGTAGTATCGATCCGGCAAACGGTATTGATACCTCGGAAATGGCTAATTTCCTGAATATGTTTGCCG
CTGTCGTTTATTTACAAAACGGCGGTCTGGTCACGATGGTTGACGTGTTAAATAAAAGCTATCAGCTATGCGATCCGATG
AACGAGTGCACGCCTTCATTACCGCCGCTATTAACGTTTATTAATCAGGTGGCTCAAAACGCCTTGGTTCTGGCCAGTCC
GGTGGTATTAGTGCTGTTGCTGTCAGAAGTATTCCTGGGTTTATTGTCGCGCTTTGCTCCGCAAATGAACGCCTTTGCGA
TTTCACTGACGGTAAAAAGCGGCATTGCCGTTTTAATTATGCTGCTTTATTTCTCTCCGGTACTACCGGACAATGTACTG
CGACTCTCTTTCCAGGCCACAGGGTTAAGCAGTTGGTTTTACGAGCGAGGGGCGACGCATGTCCTCGAATAA

Protein sequence :
MFYALYFEIHHLVASAALGFARVAPIFFFLPFLNSGVLSGAPRNAIIILVALGVWPHALNEAPPFLSVAMIPLVLQEAAV
GVMLGCLLSWPFWVMHALGCIIDNQRGATLSSSIDPANGIDTSEMANFLNMFAAVVYLQNGGLVTMVDVLNKSYQLCDPM
NECTPSLPPLLTFINQVAQNALVLASPVVLVLLLSEVFLGLLSRFAPQMNAFAISLTVKSGIAVLIMLLYFSPVLPDNVL
RLSFQATGLSSWFYERGATHVLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaR NP_461809.1 needle complex export protein Virulence SPI-1 Protein 9e-106 100
spaR NP_806491.1 virulence-associated secretory protein Virulence SPI-1 Protein 2e-104 99
spaR YP_217807.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 1e-103 99
spaR NP_457282.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 2e-104 99
spaR AAS66867.1 SpaR Not tested SSR-2 Protein 7e-33 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epaR YP_002147785.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG0549 Protein 4e-106 100
epaR YP_002147785.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG1014 Protein 8e-36 52
epaR YP_002147785.1 type III secretion apparatus protein SpaR/YscT/HrcT VFG2453 Protein 7e-32 45