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Name : SeAg_B3006 (SeAg_B3006) Accession : - Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Virulence Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 2936383 - 2937612 bp Length : 1230 bp Strand : - Note : cell invasion protein SipC (Effector protein sipC); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF09599; match to protein family HMM TIGR02101 DNA sequence : ATGTTAATTAGTAATGTGGGAGTAAATCCCGCCGCTTATTTAAATAATCATTCTGTTGAGAATAGTTCACAGACAGCTTC GCAATCCGTTAGCGCTAAAGATATTCTGAATAGTATTGGTATTAGCAGCAGTAAAGTCAGTGACCTGGGGTTGAGTCCTA CACTGAGCGCGCCTGCGCCAGGGGTATTAACGCAAACCCCCGGAACGATCACGTCCTTTTTAAAAGCCAGTATTCAAAAT ACCGACATGAATCAGGATTTGAATGCTCTGGCAAATAATGTCACGACTAAAGCGAATGAGGTTGTGCAAACCCAGTTACG CGAGCAGCAGGCAGAAGTCGGAAAGTTTTTTGATATTAGCGGAATGTCTTCCAGTGCCGTTGCGCTGTTGGCTGCCGCGA ATACGTTAATGCTGACGTTGAACCAGGCTGATAGCAAACTGTCTGGTAAGTTGTCATTAGTCAGCTTTGATGCAGCTAAA ACGACGGCAAGCTCCATGATGCGCGAAGGGATGAATGCGTTGTCCGGTAGTATTTCCCAGAGCGCGCTTCAGTTGGGGAT CACTGGCGTGGGCGCCAAACTGGAATATAAGGGGCTGCAGAATGAAAGAGGCGCGCTTAAACATAATGCCGCGAAGATCG ATAAACTGACCACTGAAAGCCACAGTATTAAAAACGTGCTGAACGGGCAGAATAGCGTCAAACTCGGTGCTGAAGGCGTC GATTCTCTGAAATCGTTAAATATGAAGAAAACCGGTACCGATGCGACGAAAAATCTTAATGATGCGACGCTTAAATCTAA TGCCGGAACCAGCGCCACGGAAAGTCTGGGTATTAAAGACAGTAATAAACAAATCTCCCCTGAACATCAGGCTATTCTGT CGAAACGTCTTGAGTCTGTCGAATCCGATATTCGTCTTGAGCAGAATACCATGGATATGACCCGAATCGATGCGCGCAAG ATGCAGATGACGGGCGATCTGATTATGAAAAACTCAGTTACGGTCGGTGGTATTGCAGGGGCGTCCGGGCAGTACGCCGC TACTCAGGAACGTTCCGAGCAGCAAATTAGCCAGGTGAATAACCGGGTTGCCAGCACCGCATCGGACGAAGCCCGTGAAA GTTCACGTAAATCGACCAGCCTGATTCAGGAAATGCTGAAAACAATGGAGAGCATTAACCAGTCGAAAGCATCCGCACTC GCTGCTATCGCAGGCAATATTCGCGCTTAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sipC | NP_461805.1 | translocation machinery component | Virulence | SPI-1 | DNA | 0.0 | 99.6 |
| sipC | NP_457278.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | DNA | 0.0 | 99.3 |
| sipC | NP_806487.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | DNA | 0.0 | 99.3 |
| sipC | YP_217803.1 | cell invasion protein | Virulence | SPI-1 | DNA | 0.0 | 99.3 |
