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Name : SeAg_B3004 (SeAg_B3004) Accession : YP_002147780.1 Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Virulence Product : cell invasion protein SipA Function : - COG functional category : - COG ID : - EC number : - Position : 2933205 - 2935217 bp Length : 2013 bp Strand : - Note : identified by match to protein family HMM PF09052 DNA sequence : ATGCAGACCGAGATCAAAACGCAGGCCACGAATCTTGCGGCGAATCTTTCCGCAGTCAGAGAAAGTGCCACAACGACGCT GTCAGGGGAAATTAGAGGCCCGCAACTGGAAGATTTTCCCGCGCTGATCAAACAGGCGAGTCTGGATGCGTTGTTTAAAT GCGGGAAAGACGCTGAGGCGTTAAAAGAAGTTTTTACCAATTCAAATAATGTCGCCGGTAAGAAAGCGATAATGGAGTTT GCCGGGCTCTTTCGTTCAGCGCTCAACGCCACCAGTGATTCTCCTGCGGCGAAGACGCTACTGATGAAGGTGGGGGCAGA GTATACCGCGCAAATCATAAAAGATGGCCTGAAAGAAAAGTCAGCTTTTGGACCATGGATGCCAGAAACAAAGAAAGCGG AAGCGAAGCTGGAAAACCTGGAAAAGCAGCTGTTAGATATCATCAAAAATAACACTGGCGGTGAATTAAGTAAATTATCG ACGAATCTTGTTATGCAGGAGGTGATGCCCTATATTGCCAGCTGCATTGAACATAACTTTGGCTGTACGTTGGATCCGTT AACCCGCAGCAGTCTTACGCAGCTTGTTGACAAAGCGGCGGCGAAGGCGGTTGAGGCGCTTGATATGTGCCACCAAAAAT TAACGCAAGAGCAGGGTACCAGCGTAGGACGGGAAGCCCGGCACCTTGAAACGCAAACGTTGATACCCCTGCTGCTACGT AATGTTTTTGCACAAATTCCTGCAGATAAACTGCCTGACCCTAAAATTCCGGAACCTGCGGCTGGACTAGTACCTGATGG TGGGAAAAAAGCAGAACCTACGGGTATTAATATCAATATTAATATTGATAGCAGTAGCCATAGCGTGGATAACAGTAAGC ATATTAACAATAGCCGAAGCCATGTCGATAATAGCCAGCGCCATATCGATAATAGCAACCATGATAATAGCCGGAAGACG ATTGATAATAGCCGAACATTTATTGATAACAGCCAACGCCATGGCGAGTCACACCATTCGACTAACAGCAGTAACGTAAG TCATAGTCATTCGCGTGTGGATTCGACTACGCATCAAACGGAGACGGCACACAGCGCCAGCACAGGGGCAATTGACCATG GCATCGCGGGTAAAATTGACGTCACGGCTCATGCGACGGCAGAGGCTGTGACCAACGCTTCATCCGAAAGTAAAGATGGA AAGGTGGTCACGTCAGAAAAGGGCACTACGGGTGAAACACCCTCTTTTGATGAAGTTGATGGCGTAACCAGCAAGAACAT TATCGGCAAGCCTGTACAGGCCACGGTGCACGGCGTTGATGATAATAAACAGCAAAGCCAGACGGCAGAGATTGTGAATG TGAAGCCGCTTGCCAGTCAACTGGCTGGCGTCGAGAATGTTAAAATCGATACTTTACAATCAGACTCGACGGTAATTACA GGTAATAAAGCCGGTACGACCGATAATGATAATAGCCAGACAGATAAGACTGGCCCATTTTCTGGTTTGAAGTTTAAGCA AAATAGTTTCCTCTCAACAGTACCGAGCGTTACGAATATGCATTCAATGCATTTCGACGCCCGTGAGACGTTTTTGGGTG TGATACGTAAAGCCCTGGAGCCGGATACCTCCACACCGTTCCCTGTACGCAGAGCGTTTGACGGCTTGCGTGCGGAAATA TTACCCAATGACACGATAAAGAGTGCAGCGTTGAAAGCGCAATGTAGCGATATTGACAAGTACCCAGAATTGAAAGCGAA AATGGATACGCTTAAAGAGGTCATTACTCATCATCCACAAAAAGAAAAACTGGCTGAGATTGCACTGCAGTTTGCCAGAG AGGCGGGGCTGACCAGGCTAAAAGGGGAAACTGACTATGTGTTAAGTAATGTGCTGGACGGCCTTATCGGAGACGGTAGC TGGCGAGCTGGCCCGGCTTACGAGTCATACCTGAATAAACCTGGCGTGGATCGGGTTATTACTACCGTTGATGGCTTGCA CATGCAGCGTTAA Protein sequence : MQTEIKTQATNLAANLSAVRESATTTLSGEIRGPQLEDFPALIKQASLDALFKCGKDAEALKEVFTNSNNVAGKKAIMEF AGLFRSALNATSDSPAAKTLLMKVGAEYTAQIIKDGLKEKSAFGPWMPETKKAEAKLENLEKQLLDIIKNNTGGELSKLS TNLVMQEVMPYIASCIEHNFGCTLDPLTRSSLTQLVDKAAAKAVEALDMCHQKLTQEQGTSVGREARHLETQTLIPLLLR NVFAQIPADKLPDPKIPEPAAGLVPDGGKKAEPTGINININIDSSSHSVDNSKHINNSRSHVDNSQRHIDNSNHDNSRKT IDNSRTFIDNSQRHGESHHSTNSSNVSHSHSRVDSTTHQTETAHSASTGAIDHGIAGKIDVTAHATAEAVTNASSESKDG KVVTSEKGTTGETPSFDEVDGVTSKNIIGKPVQATVHGVDDNKQQSQTAEIVNVKPLASQLAGVENVKIDTLQSDSTVIT GNKAGTTDNDNSQTDKTGPFSGLKFKQNSFLSTVPSVTNMHSMHFDARETFLGVIRKALEPDTSTPFPVRRAFDGLRAEI LPNDTIKSAALKAQCSDIDKYPELKAKMDTLKEVITHHPQKEKLAEIALQFAREAGLTRLKGETDYVLSNVLDGLIGDGS WRAGPAYESYLNKPGVDRVITTVDGLHMQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sipA | NP_461803.1 | secreted effector protein | Virulence | SPI-1 | Protein | 0.0 | 98 |
| sipA | YP_217801.1 | cell invasion protein | Virulence | SPI-1 | Protein | 0.0 | 98 |
| sipA | NP_457276.1 | pathogenicity island 1 effector protein (function unknown) | Virulence | SPI-1 | Protein | 0.0 | 97 |
| sipA | NP_806485.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 0.0 | 97 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeAg_B3004 | YP_002147780.1 | cell invasion protein SipA | VFG0543 | Protein | 0.0 | 98 |
