|
Name : SeAg_B3000 (SeAg_B3000) Accession : YP_002147776.1 Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Virulence Product : effector protein SptP Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2453 EC number : 3.1.3.48 Position : 2930597 - 2932204 bp Length : 1608 bp Strand : - Note : identified by match to protein family HMM PF00102; match to protein family HMM PF03545; match to protein family HMM PF09119 DNA sequence : TTGAATAATTTAACGTTGTCTTCGTTTTCAAAAGTTGGTGTGTCGAATGATGCCCGACTTTATATTGCTAAGGAAAATAC TGATAAGGCATATGTTGCGCCTGAAAAATTTTCGTCAAAAGTATTAACCTGGCTTGGAAAAATGCCGTTATTTAAAAACA CTGAAGTGGTGCAAAAACATACGGAAAATATCAGAGTACAGGACCAAAAGATTTTACAGACATTTCTCCATGCACTAACG GAAAAATATGGGGAAACAGCGGTTAATGACGCACTGTTAATGTCCCGTATAAATATGAACAAACCCCTTACCCAACGTTT AGCAGTGCAGATCACGGAGTGTGTAAAAGCTGCTGACGAAGGGTTTATAAACCTTATTAATATCAAGGATAATGTTGGTG TCAGGAATGCCGCTTTAGTCATAAAAGGCGGCGATACAAAAGTGGCAGAAAAAAATAACGATGTTGGAGCAGAAAGTAAG CAACCTTTACTTGATATCGCGCTAAAGGGACTTAAAAGAACATTACCGCAACTGGAACAAATGGATGGAAATAGCCTGCG AGAAAACTTCCAGGAGATGGCTTCAGGTAACGGCCCGCTGCGTTCATTAATGACGAATTTACAGAATTTAAATAAAATTC CAGAGGCTAAACAACTTAATGATTATGTTACAACGTTAACAAATATTCAGGTCGGTGTAGCCCGGTTCTCACAATGGGGA ACCTGTGGAGGAGAGGTTGAGAGGTGGATTGATAAAGCCTCTACTCATGAATTAACCCAGGCTGTAAAAAAAATTCACGT TATTGCTAAAGAACTGAAAAACGTTACAGCTGAACTTGAGAAAATAGAAGCCGGCGCGCCAATGCCACAGACGATGAGCG GACCGACACTGGGCCTGGCACGGTTTGCGGTCAGCAGCATTCCAATTAATCAGCAAACCCAGGTGAAACTGAGCGATGGA ATGCCTGTGCCAGTGAATACGTTAACTTTTGACGGTAAGCCTGTGGCATTAGCCGGTTCGTACCCAAAAAATACGCCGGA TGCGCTGGAAGCGCATATGAAAATGCTTCTTGAAAAAGAATGCTCGTGCCTGGTGGTGTTAACGTCGGAAGATCAGATGC AGGCAAAACAATTACCACCCTATTTCAGAGGGAGCTACACCTTTGGCGAGGTGCATACCAACAGCCAAAAAGTGAGCTCA GCCAGTCAGGGAGGTGCGGTAGACCAATACAATATGCAACTGTCCTGCGGAGAAAAGCAGTATACAATCCCGGTATTACA TGTCAAAAATTGGCCAGATCACCAGCCGTTACCGTCTACTAATCAGTTAGAATACCTGGCGGATATTGTGAAAAATAGTA ACCAAAATGGCGCGCCGGGACGTAGTTCATCAGATAAGCATTTACCGATGATTCATTGTCTGGGCGGAGTGGGTAGAACC GGAACGATGGCGGCGGCCCTTGTACTTAAGGATAATCCTCATAGTAATCTGGAGCAGGTACGTGCAGATTTCCGGGATTC ACGGAACAATAGAATGCTGGAAGACGCCTCACAGTTTGTACAACTAAAAGCAATGCAAGCCCAGCTGCTTATGACGACGG CAAGCTGA Protein sequence : MNNLTLSSFSKVGVSNDARLYIAKENTDKAYVAPEKFSSKVLTWLGKMPLFKNTEVVQKHTENIRVQDQKILQTFLHALT EKYGETAVNDALLMSRINMNKPLTQRLAVQITECVKAADEGFINLINIKDNVGVRNAALVIKGGDTKVAEKNNDVGAESK QPLLDIALKGLKRTLPQLEQMDGNSLRENFQEMASGNGPLRSLMTNLQNLNKIPEAKQLNDYVTTLTNIQVGVARFSQWG TCGGEVERWIDKASTHELTQAVKKIHVIAKELKNVTAELEKIEAGAPMPQTMSGPTLGLARFAVSSIPINQQTQVKLSDG MPVPVNTLTFDGKPVALAGSYPKNTPDALEAHMKMLLEKECSCLVVLTSEDQMQAKQLPPYFRGSYTFGEVHTNSQKVSS ASQGGAVDQYNMQLSCGEKQYTIPVLHVKNWPDHQPLPSTNQLEYLADIVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRT GTMAAALVLKDNPHSNLEQVRADFRDSRNNRMLEDASQFVQLKAMQAQLLMTTAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sptP | NP_461799.1 | protein tyrosine phosphatase/GTPase activating protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
| sptP | YP_217797.1 | protein tyrosine phosphate | Not tested | SPI-1 | Protein | 0.0 | 98 |
| stpA | NP_457272.1 | tyrosine phosphatase (associated with virulence) | Virulence | SPI-1 | Protein | 0.0 | 94 |
| stpA | NP_806481.1 | tyrosine phosphatase | Virulence | SPI-1 | Protein | 0.0 | 94 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeAg_B3000 | YP_002147776.1 | effector protein SptP | VFG0540 | Protein | 0.0 | 99 |
