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Name : SeAg_B2993 (SeAg_B2993) Accession : YP_002147769.1 Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Virulence Product : type III secretion apparatus lipoprotein, YscJ/HrcJ family Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 2923524 - 2924282 bp Length : 759 bp Strand : - Note : identified by match to protein family HMM PF01514; match to protein family HMM TIGR02544 DNA sequence : ATGATTCGTCGATATCTATATACCTTTCTGCTGGTAATGACCCTTGCCGGCTGTAAGGATAAGGATCTTTTAAAAGGACT GGACCAGGAACAGGCTAATGAGGTCATTGCCGTTCTGCAAATGCACAATATAGAGGCGAATAAAATTGATAGCGGAAAAT TGGGCTATAGCATTACCGTTGCTGAGCCTGATTTTACCGCTGCGGTGTACTGGATTAAAACTTATCAGCTTCCTCCCCGG CCACGGGTGGAAATAGCGCAGATGTTCCCGGCGGATTCGCTGGTATCGTCTCCGCGAGCTGAAAAGGCCAGGTTATATTC GGCTATTGAACAGCGACTGGAACAGTCATTACAGACGATGGAGGGCGTGCTCTCCGCCAGGGTCCATATTAGTTATGATA TTGATGCTGGTGAAAATGGCCGCCCGCCAAAACCTGTTCATCTGTCGGCATTAGCCGTATATGAACGAGGTTCGCCGCTT GCGCATCAGATCAGCGATATCAAGCGTTTCTTAAAGAATAGTTTTGCCGATGTGGATTATGACAACATTTCTGTTGTGTT GTCAGAACGTTCTGATGCCCAATTACAGGCTCCCGGCACACCAGTAAAACGTAATTCTTTTGCAACCAGTTGGATTGTGT TGATTATTTTGTTATCCGTGATGTCAGCAGGCTTTGGCGTCTGGTATTACAAAAACCATTATGCCCGCAATAAGAAAGGC ATAACGACTGATGATAAGGCGAAATCGTCAAATGAATAG Protein sequence : MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPR PRVEIAQMFPADSLVSSPRAEKARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPL AHQISDIKRFLKNSFADVDYDNISVVLSERSDAQLQAPGTPVKRNSFATSWIVLIILLSVMSAGFGVWYYKNHYARNKKG ITTDDKAKSSNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prgK | NP_457265.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 5e-115 | 99 |
| prgK | NP_806474.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 5e-115 | 99 |
| prgK | YP_217790.1 | cell invasion protein | Virulence | SPI-1 | Protein | 4e-116 | 99 |
| prgK | NP_461792.1 | needle complex inner membrane lipoprotein | Virulence | SPI-1 | Protein | 4e-116 | 99 |
| prgK | AAS66872.1 | PrgK | Virulence | SSR-2 | Protein | 5e-57 | 58 |
| ECs3716 | NP_311743.1 | EprK | Not tested | LIM | Protein | 3e-54 | 56 |
| eprK | AAZ31284.1 | EprK | Virulence | ETT2 | Protein | 4e-53 | 55 |
| ysaJ | AAS66833.1 | YsaJ | Not tested | SSR-1 | Protein | 4e-35 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeAg_B2993 | YP_002147769.1 | type III secretion apparatus lipoprotein, YscJ/HrcJ family | VFG0533 | Protein | 2e-116 | 99 |
| SeAg_B2993 | YP_002147769.1 | type III secretion apparatus lipoprotein, YscJ/HrcJ family | VFG0998 | Protein | 3e-45 | 47 |
| SeAg_B2993 | YP_002147769.1 | type III secretion apparatus lipoprotein, YscJ/HrcJ family | VFG1787 | Protein | 2e-37 | 46 |
