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Name : SeAg_B2992 (SeAg_B2992) Accession : YP_002147768.1 Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Virulence Product : type III secretion apparatus protein OrgA/MxiK Function : - COG functional category : - COG ID : - EC number : - Position : 2922953 - 2923531 bp Length : 579 bp Strand : - Note : identified by match to protein family HMM PF09482; match to protein family HMM TIGR02555 DNA sequence : ATGAATAGGCAGCCATTACCCATTATCTGGCAAAGAATCATTTTTGATCCGTTATCGTATATCCATCCTCAGCGGTTGCA GATAGCGCCGGAAATGATTGTCAGACCCGCCGCCAGGGCGGCGGCAAATGAGTTAATACTGGCGGCATGGCGGCTTAAGA ACGGAGAAAAGGAGTGTATTCAAAACTCACTGACGCAGCTGTGGCTGCGTCAGTGGCGCCGACTGCCGCAAGTAGCGTAT TTACTCGGTTGCCATAAACTGAGAGCCGATCTGGCAAGGCAGGGAGCCTTGCTTGGCCTGCCGGATTGGGCGCAAGCATT TTTGGCAATGCATCAGGGAACAAGTTTATCTGTCTGCAATAAGGCGCCGAATCACCGGTTTTTACTTAGCGTCGGGTATG CACAGTTAAATGCCCTGAATGAATTTTTACCTGAATCTTTAGCACAGCGTTTTCCTTTGCTTTTTCCTCCATTTATTGAG GAGGCATCGAAGCAGGATGCTGTAGAAATGTCAATTTTGCTACTGGCCTTACAATATGCTCAAAAATATCCCAATTCCGT CCCCGCTTTCGCCTGTTGA Protein sequence : MNRQPLPIIWQRIIFDPLSYIHPQRLQIAPEMIVRPAARAAANELILAAWRLKNGEKECIQNSLTQLWLRQWRRLPQVAY LLGCHKLRADLARQGALLGLPDWAQAFLAMHQGTSLSVCNKAPNHRFLLSVGYAQLNALNEFLPESLAQRFPLLFPPFIE EASKQDAVEMSILLLALQYAQKYPNSVPAFAC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orgA | YP_217789.1 | inner membrane protein | Not tested | SPI-1 | Protein | 2e-72 | 99 |
| orgAa | NP_457264.1 | cell invasion protein | Virulence | SPI-1 | Protein | 1e-72 | 99 |
| orgA | NP_806473.1 | oxygen-regulated invasion protein | Virulence | SPI-1 | Protein | 1e-72 | 99 |
| orgA | NP_461791.1 | needle complex assembly protein | Virulence | SPI-1 | Protein | 1e-72 | 99 |
