Gene Information

Name : SeAg_B2985 (SeAg_B2985)
Accession : YP_002147762.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Virulence
Product : chelated iron transport system membrane protein YfeC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2916617 - 2917477 bp
Length : 861 bp
Strand : +
Note : identified by match to protein family HMM PF00950; match to protein family HMM PF01032

DNA sequence :
ATGAACTGGCTTGTTGAGCCGTTTGGCTACCAGTATATGCTCAACGCGATGTGGGTCTCCGCGATGGTGGGCGGTCTGTG
CGCGTTTCTCTCCTGCTATTTGATGCTCAAAGGCTGGTCGCTCATTGGCGATGCGCTATCTCACTCTATTGTGCCTGGCG
TCGCTGGCGCCTGGATATTAGGGCTGCCCTTCTCGCTCGGCGCGTTTCTTTCCGGCGGACTGGCGGCAGGCAGTATGCTC
TTTCTTAACCAACGCTCACGCCTGAAAGAAGACGCGATTATCGGGCTTATCTTCTCCTCTTTTTTTGGCGTCGGCCTTTT
TATGGTGTCGCTCAATCCGATGTCGGTGAATATCCAGACGATTATTCTCGGCAACGTGCTGGCGATCGCGCCAGCGGATA
TTGCGCAACTGGCGATTATCGGCGCAGTCTCGCTGACGATTCTGCTGTTAAAGTGGAAAGATCTGATGGTCGTCTTTTTC
GATGAGACCCATGCGCGTTCTATCGGGCTTAATCCGGGTCGACTAAAGCTGTTGTTTTTCACTCTATTGTCCGTCTCCAC
CGTGGCGGCCCTGCAAACCGTTGGGGCGTTCCTGGTGATCTGTCTCGTCGTCACGCCGGGCGCGACGGCCTGGTTACTCA
CCGACCGTTTTCCACGTCTGCTCATGATTGCCGTCGTGATTGGCAGCCTGACCAGTTTTCTGGGCGCATGGCTTAGCTAC
TGGCTGGATGGCGCCACGGGTGGAATTATTGTCGTCATGCAAACCTTACTGTTCATCACAGCCTTTATTTTCGCCCCGAA
ACACGGTCTGTTAGCCAACCGTCGACGCGCCCGCCTGCAGAAGGAGCCGACATGTTCTTAA

Protein sequence :
MNWLVEPFGYQYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAWILGLPFSLGAFLSGGLAAGSML
FLNQRSRLKEDAIIGLIFSSFFGVGLFMVSLNPMSVNIQTIILGNVLAIAPADIAQLAIIGAVSLTILLLKWKDLMVVFF
DETHARSIGLNPGRLKLLFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLMIAVVIGSLTSFLGAWLSY
WLDGATGGIIVVMQTLLFITAFIFAPKHGLLANRRRARLQKEPTCS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-114 99
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-114 99
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-114 99
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-114 99
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-114 99
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-39 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-39 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-39 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-39 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeAg_B2985 YP_002147762.1 chelated iron transport system membrane protein YfeC BAC0351 Protein 8e-115 99
SeAg_B2985 YP_002147762.1 chelated iron transport system membrane protein YfeC BAC0441 Protein 5e-75 66
SeAg_B2985 YP_002147762.1 chelated iron transport system membrane protein YfeC BAC0352 Protein 1e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeAg_B2985 YP_002147762.1 chelated iron transport system membrane protein YfeC VFG0527 Protein 7e-115 99
SeAg_B2985 YP_002147762.1 chelated iron transport system membrane protein YfeC VFG0528 Protein 1e-39 42