Gene Information

Name : SeAg_B2486 (SeAg_B2486)
Accession : YP_002147305.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Virulence
Product : regulatory protein, LacI
Function : -
COG functional category : K : Transcription
COG ID : COG1609
EC number : -
Position : 2419064 - 2420083 bp
Length : 1020 bp
Strand : +
Note : identified by match to protein family HMM PF00356; match to protein family HMM PF00532

DNA sequence :
ATGTCGATACCCCGTAAACGGCGCAGTACCGGTAAAGTGACTATCGCCGATGTAGCCCAACTTGCCGGTGTAGGCACGAT
GACCGTATCACGAGCCTTACGCACGCCGGAACAGGTCTCTGATAAACTCCGGGAGAAAATCGAAGCGGCAGTGCATGAGC
TGGGCTATATGCCCAATCTCGCCGCCAGCGCGCTGGCGTCTGCCTCCTCGCACACCATCGCGATGGTCGTACCGAACCTT
GCGGAAGCGGGGTGTTCTGAAATGTTCGCCGGGCTGCAACAAATTTTACAGCCCGCTGGCTACCAGATTATGCTGGCGGA
ATCGCAACATCGCGTGGAACAAGAGGAGAAGCTGCTCGAAACGCTGCTGGCCTCCAACATTGCCGCGGCGATTCTGCTTA
GCGTCGAACATAGCACTACCGTGCGCCAGTGGCTGAAAAATGCCTCTATCCCGGTGATGGAGATGGGCGCGATTCGCAGC
GATCCTATTGATATGAATATCGGTATTGATAACGTTGCGGCAATGTATGAGCTGACGGAAATGCTGATTCAGCGCGGTTA
TCAGAATATCGGGCTGCTATGCGCCAATCAGGAACAGTGGATTTTTCAGCAACATCTGCACGGCTGGTACAAAGCGATGC
TTCGCCACCATATGTCGCCAAACCGGGTGATTAATGCCGCCTTGCCGCCCAATTTTTCTACCGGCGCGTCGCAGCTGCCG
GAGTTTTTACTGGCGTGGCCGGAGCTGGACGCGCTGGTATGCGTATCGGATGAGCTGGCCTGCGGCGCGTTATACGAGTG
CCAACGACGGCGGATCAAAGTTCCGGACGATTTAGCGGTGGTCGGGTTTGGCGATAGCGATGTCAGCCGGGTCTGCCAGC
CGCCGTTAACCACAATGGCCGTACCGCACCGTAAGATTGGCAGTGAAGCCGGACGGGCGCTGTTGGAAAGGTTAAATCAG
GGAAACTGGAGCGATCGAAAATCCATCGCCTCCAGTTTATGTATGCGGGAAAGCTGCTAA

Protein sequence :
MSIPRKRRSTGKVTIADVAQLAGVGTMTVSRALRTPEQVSDKLREKIEAAVHELGYMPNLAASALASASSHTIAMVVPNL
AEAGCSEMFAGLQQILQPAGYQIMLAESQHRVEQEEKLLETLLASNIAAAILLSVEHSTTVRQWLKNASIPVMEMGAIRS
DPIDMNIGIDNVAAMYELTEMLIQRGYQNIGLLCANQEQWIFQQHLHGWYKAMLRHHMSPNRVINAALPPNFSTGASQLP
EFLLAWPELDALVCVSDELACGALYECQRRRIKVPDDLAVVGFGDSDVSRVCQPPLTTMAVPHRKIGSEAGRALLERLNQ
GNWSDRKSIASSLCMRESC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vpeR ADD91728.1 putative transcriptional regulatory protein VpeR Virulence PAI-I AL862 Protein 9e-55 43
unnamed CAC39290.1 hypothetical protein Not tested LPA Protein 3e-53 42