Gene Information

Name : SeAg_B1784 (SeAg_B1784)
Accession : YP_002146653.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 1742260 - 1742880 bp
Length : 621 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281

DNA sequence : 
ATGGCGACAATTCATCTACTGGATGATGATACGGCGGTCACTAACGCGTGCGCGTTTTTACTGGAAAGTCTGGGATATGA
CGTAAAATGCTGGACGCAGGGGGCGGATTTTTTGGCGCAGGCCAGTCTGTATCAGGCCGGGGTCGTATTACTGGATATGC
GAATGCCGGTACTGGATGGGCAGGGCGTTCATGATGCGTTGCGCCAGTGCGGAAGTACCCTGGCGGTTGTTTTTCTTACC
GGGCATGGCGATGTACCGATGGCCGTGGAGCAGATGAAACGCGGCGCCGTCGATTTTCTGCAAAAACCGGTATCGGTAAA
ACCGCTACAGGCGGCGCTGGAGCGTGCGCTGACGGTTTCATCGGCAGCGGTGGCGCGCCGTGAGATTATACTGTGTTACC
AGCAGTTGACGCCGAAAGAGCGTGAGCTGGCCAGCCTGGTGGCAAAAGGGTTTATGAACCGTGAAATTGCGGAAGCGATG
AATATCGCGGTGCGTACCGTAGAGGTGCACCGCGCCAGAGTCATGGAAAAAATGCAGGCCGGTAGCCTGGCGGAACTGAT
TAGACGCTTCGAAAAAATGGCCTCGCCAGAGACCAGAATACGAACAACGTATGAGCCATGA

Protein sequence : 
MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFLT
GHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAM
NIAVRTVEVHRARVMEKMQAGSLAELIRRFEKMASPETRIRTTYEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 1e-94 100
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 1e-94 100
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 8e-95 100
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 1e-94 100
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 8e-95 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeAg_B1784 YP_002146653.1 response regulator VFG0488 Protein 2e-95 100