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Name : SeAg_B1777 (SeAg_B1777) Accession : YP_002146646.1 Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Virulence Product : type III secretion apparatus protein, YscD/HrpQ family Function : - COG functional category : - COG ID : - EC number : - Position : 1732896 - 1734095 bp Length : 1200 bp Strand : - Note : identified by match to protein family HMM TIGR02500 DNA sequence : ATGGTTAATCCAAAGAACTCCTGGAAAATACGTTTTTTAGGTCACGTTTTACAAGGCCGGGAAGTATGGCTGAATGAAGG TAACCTGTCACTGGGGGAGAAAGGATGCGATATTTGTATTCCGCTTACTATAAATGAAAAAATTATTCTGAGAGAACAGG CAGATAGTTTATTTGTTGATGCCGGGAAAGCCAGAGTTAGAGTTAATGGCCGCAGATTTAATCCAAATAAGCCGCTACCA TCCAGTGGGGTTTTGCAGGTTGCGGGAGTGGCTATCGCGTTTGGTAAACAGGATTGTGAACTTGCTGATTATCAAATACC CGTTTCCAGATCAGGCTACTGGTGGTTGGCTGGTGTATTCTTGATTTTCATCGGTGGAATGGGTGTCCTGTTAAGTATTG GCGGTCAGCCTGAAACGGTAAATGATTTACCTTTGCGGGTTAAGTTTTTATTAGACAAAAGCAATATTCATTATGTGCGG GCGCAATGGAAAGAAGATGGAAGCCTGCAGTTGTCCGGTTATTGCGCGTCAAGCGAACAGATGCAAAAGGTGAGAGCGAC TCTCGAATCATGGGGGGTCATGTATCGGGATGGTGTAATCTGTGATGACTTATTGATACGAGAAGTGCAGGATGTTTTGA TAAAAATGGGTTACCCGCATGCTGAAGTATCCAGCGAAGGGCCGGGAAGCGTGTTAATTCATGATGATATACAAATGGAT CAGCAATGGCGTAAGGTTCAACCATTACTTGCAGATATTCCCGGGTTATTGCACTGGCAGATTAGTCATTCTCATCAGTC TCAGGGGGATGATATTATTTCTGCGATAATAGAGAACGGTTTAGTGGGCCTTGTCAATGTTACGCCAATGCGGCGCTCTT TTGTTATCAGTGGTGTACTGGATGAATCTCATCAACGCATTTTGCAAGAAACGTTAGCAGCATTAAAGAAAAAGGACCCC GCTCTTTCTTTAATTTATCAGGATATTGCGCCTTCTCATGATGAAAGCAAGTATCTGCCTGCGCCAGTGGCTGGCTTTGT ACAGAGTCGCCATGGTAATTACTTATTACTGACGAATAAAGAGCGTTTACGTGTAGGGGCATTGTTACCCAATGGGGGAG AAATTGTCCATCTGAGTGCCGATGTGGTAACGATTAAACATTATGATACTTTGATTAACTATCCATTAGATTTTAAGTGA Protein sequence : MVNPKNSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADSLFVDAGKARVRVNGRRFNPNKPLP SSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVFLIFIGGMGVLLSIGGQPETVNDLPLRVKFLLDKSNIHYVR AQWKEDGSLQLSGYCASSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVLDESHQRILQETLAALKKKDP ALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaD | NP_805066.1 | pathogenicity island protein | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssaD | NP_460360.1 | virulence protein | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssaD | YP_216403.1 | secretion system apparatus protein SsaD | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssaD | NP_456133.1 | putative pathogenicity island protein | Virulence | SPI-2 | Protein | 0.0 | 99 |
| spiB | AAC44302.1 | SpiB | Virulence | SPI-2 | Protein | 6e-149 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeAg_B1777 | YP_002146646.1 | type III secretion apparatus protein, YscD/HrpQ family | VFG0496 | Protein | 0.0 | 99 |
