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Name : SeAg_B1773 (SeAg_B1773) Accession : YP_002146642.1 Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Virulence Product : translocation machinery component Function : - COG functional category : S : Function unknown COG ID : COG5613 EC number : - Position : 1729533 - 1730987 bp Length : 1455 bp Strand : - Note : identified by match to protein family HMM PF04888 DNA sequence : ATGAATCGAATTCACAGTAATAGCGACAGCGCTGCAGGAGTAACCGCCTTAACACATCATCACTTAAGCAATGTCAGTTG CGTTTCCTCGGGTTCGCTGGGAAAGCGCCAGCATCGTGTGAATTCTACTTTTGGCGATGGCAACGCCGCGTGCCTGTTAT CAGGGAAAATTAGTCTTCAGGAGGCAAGCAATGCGTTGAAGCAACTGCTTGATGCCGTACCCGGAGATCATAAGCGTCCA TCATTGCCTGACTTTTTGCAGACCAATCCCGCTGTTTTATCAATGATGATGACGACATTAATACTCAACGTCTTTGGTAA TAACGCCCAATCGTTATGCCAACAGCTTGAGCGGGCAACTGAGGTGCAAAATGCATTGCGTAATAAGCAGGTAAAGGAGT ATCAGGAGCAGATCCAGAAAGCGATAGAGCAGGAGGATAAAGCGCGTAAAGCGGGCATTTTTGGCGCTATTTTTGACTGG CTTACCGGCATATTTGAAACCGTGATTGGCGCCTTAAAAGTTGTGGAGGGTTTTCTGTCCGGTAATCCCGCAGAAATGGC TAGCGGCGTAGCTTATATAGCCGCAGGTTGTGCAGGAATGGTTAAAGCCGGAGCCGAAACGGCAATGATGTGCGGTGCTG ACCACGATACCTGTCAGGCGATTATTGACGTGGCAAGTAAAATTCAAGTTGGTTGTGAAGTCGTCGCGATGGCACTGGAT GTTTTCCAGATTGGTCGTGCTTTTATGGAGACGAGAGGCTTATCTGGCGCAGCTGCAAAAGTTCTTGACTCCGGCTTAGG CGAAGAAATGGTTGAGCGTATGGTAGGTGCAGGGGAAGGAGAAATAGAGGAGTTGGCTGAAAAGTTTGGCGAAGAGGTGA GCGAAAATTTTTCCAAACAATTTGAGGCGATTGAACGTGAAATGGTTTCGCCGGGCGAGATGGAAGAGGAGTCTGCTGAG TTTTCTCGTAAGGTAGAAAATAATATGACGCGAAGCGCGGGAAAAAGTTTTACGAAAGAGGGGGTGAAAGCCATGGCAAA AGAAGCGGCAAAAGAAGCCCTGGAAAAATGTGCGCAGGAAGGGGGAAAGTTTCTGTTAAAAAATTTTCGTAATAAAGTTC TCTGGAATATGTTCAAAAAAATCCTGTATGCCTTACTGAGTGATTGTTCATTTAAAGGCTTACAGGCTATCAGATGTGCA ACCGAGGGCGCCAATCAGATGAATACTGGCATGGTTAACACAGAAAAAGCGAAGATCGAAAAGAAAATAGAGCAATTAAT AACTCAGCAACGGTTTCTGGATTTCATAATGCAACAAACAGAAAACCAGAAAAAGATAGAACAAAAACGCTTAGAGGAGC TTTATAAGGGGAGCGGTGCCGCGCTTAGAGATGTATTAGATACCATTGATCACTATAGTAGCGTTCAGGCGAGAATAGCT GGCTGTCGCGCTTAA Protein sequence : MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQEASNALKQLLDAVPGDHKRP SLPDFLQTNPAVLSMMMTTLILNVFGNNAQSLCQQLERATEVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDW LTGIFETVIGALKVVEGFLSGNPAEMASGVAYIAAGCAGMVKAGAETAMMCGADHDTCQAIIDVASKIQVGCEVVAMALD VFQIGRAFMETRGLSGAAAKVLDSGLGEEMVERMVGAGEGEIEELAEKFGEEVSENFSKQFEAIEREMVSPGEMEEESAE FSRKVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCAQEGGKFLLKNFRNKVLWNMFKKILYALLSDCSFKGLQAIRCA TEGANQMNTGMVNTEKAKIEKKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA GCRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sseC | NP_460365.1 | translocation machinery component | Virulence | SPI-2 | Protein | 0.0 | 95 |
| sseC | CAA12187.1 | SseC | Virulence | SPI-2 | Protein | 0.0 | 95 |
| sseC | AAC28881.1 | SseC | Virulence | SPI-2 | Protein | 0.0 | 95 |
| sseC | YP_216408.1 | secretion system effector protein SseC | Virulence | SPI-2 | Protein | 0.0 | 94 |
| sseC | NP_456128.1 | putative pathogenicity island effector protein | Virulence | SPI-2 | Protein | 0.0 | 94 |
| sseC | NP_805071.1 | pathogenicity island effector protein | Virulence | SPI-2 | Protein | 0.0 | 94 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeAg_B1773 | YP_002146642.1 | translocation machinery component | VFG0501 | Protein | 0.0 | 95 |
