Gene Information

Name : SeAg_B1274 (SeAg_B1274)
Accession : YP_002146168.2
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Virulence
Product : guanine nucleotide exchange factor SopE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1247898 - 1248620 bp
Length : 723 bp
Strand : +
Note : identified by match to protein family HMM PF07487

DNA sequence : 
GTGACTAACATAACACTATCCACCCAGCACTATAGAATCCATAGAAGTGACGTTGAACCAGTAAAAGAAAAAACAACGGA
TAAGGACGTTTTTGCAAAAAGTATTACTGCCGTTAGAAATAGCTTTATCAGCCTGTCGACGAGTCTGTCTGATCGCTTTA
GCCTGCATCTGCAAACAGACATACCGACTAGCCATTTTCATCGTGGGAGCGCTTCTGAGGGTAGGGCAGTATTAACCAGT
AAAACTGTTAAAGATTTTATGCTGCAAAAGCTCAATAGCCTGGATATCAAAGGTAATGCGAGTAAAGATCCGGCCTATGC
TCGTCAGACATGCGAAGCCATATTATCAGCCGTGTACAGTAATAATAAAGATCACTGTTGTAAATTGCTCATCAGTAAAG
GGGTCAGTATTACCCCCTTTCTGAAAGAGATAGGAGAGGCTGCGCAGAATGCGGGGCTACCTGGGGAGATAAAAAACGGC
GTATTTACTCCAGGTGGGGCAGGGGCGAATCCTTTTGTCGTCCCCCTCATTGCTGCAGCGAGTATTAAATATCCGCATAT
GTTTATAAATCATAATCAGCAGGTGGCTTTTAAAGCGTATGCTGAGAAAATCGTTATGAAAGAGGTTACGCCGCTGTTTA
ATAAGGGGACGATGCCGACGCCACAACAATTTCAGTTAACTATAGAAAATATCGCGAATAAGTATCTTCAGAATGCCTCC
TGA

Protein sequence : 
MTNITLSTQHYRIHRSDVEPVKEKTTDKDVFAKSITAVRNSFISLSTSLSDRFSLHLQTDIPTSHFHRGSASEGRAVLTS
KTVKDFMLQKLNSLDIKGNASKDPAYARQTCEAILSAVYSNNKDHCCKLLISKGVSITPFLKEIGEAAQNAGLPGEIKNG
VFTPGGAGANPFVVPLIAAASIKYPHMFINHNQQVAFKAYAEKIVMKEVTPLFNKGTMPTPQQFQLTIENIANKYLQNAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sopE NP_458691.1 invasion-associated secreted protein. Virulence SPI-7 Protein 2e-81 68
sopE NP_807899.1 invasion-associated secreted protein Virulence SPI-7 Protein 2e-81 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeAg_B1274 YP_002146168.2 guanine nucleotide exchange factor SopE VFG0467 Protein 5e-110 97