Gene Information

Name : SeAg_B1118 (SeAg_B1118)
Accession : YP_002146026.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Unknown
Product : ISEc16, orfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1122590 - 1123456 bp
Length : 867 bp
Strand : +
Note : identified by match to protein family HMM PF00665

DNA sequence :
ATGAAGTATGTCTTCATCGAAAAACATCAGGCTGAGTTCAATATCAAAGCCATGTGCCGTGTACTTCAGATTGCCCGTAG
CGGCTGGTACGTCTGGCATCAGCGTCGTCATCAGATAAACCGGCGTCAGCGGTTCCGCCTTGTCTGTGATAACGTCATCC
GGGAAGCATTCAGTGACGCAAAACAACGCTATGGTGCGCCACGCCTGACGGATGAGCTTCGTGCTCAGGGTTACCAGTTC
AACGTGAAAACCGTGGCGGCCAGCCTGCGTCGGCAGGGGCTGCGGGCGAAAGCCTCGCGCCGGTTCCGTCCGGTCAGTTA
CCGCGAACATGGTCTGCCAGTCTCAGAGAATCTGCTGAAGCAGGACTTTTGCGCCAGCGGCCCGAAGCAGAAGTGGGTGG
ATAACATCACGTATCTTCGCACCGGTGAAGGCTGGCTTGATCTGGCCGTGGTTATCGAACTGTGGTCGCGGTCAGTCATT
GGCTGGTCGATGTCCTCGCGGATGACAGCACAGCTTGCCTGCGATGCGTTACAGATGGCGCTGTGGCGGCGTAAATGTCC
GGAAAATGTCATCGTGCATACAGACAGAGGCGGTCAGTACTGTTCAACGGATTACCAGAGCTTACTGAAACGCCATAATC
GGCGGGGAAGCATGAGCGCCAGAGATTGTTGTTACGACAATGCCTGTGCGGAAAGCTTCTTCCATACGCTGAAGGTGGAA
TGTATCCACGGAGAGGACTTTGTCAGCCGGGAAATAATGCGGACAGCAGTGTTTAATCATAGTGAGTGTGATTACAATCG
GTGGCGTCGTCACAGTGCCTGTGGCGGTCTCAGTCCGGAACAATTTGAAAACCAGAACCTCGCTTAG

Protein sequence :
MKYVFIEKHQAEFNIKAMCRVLQIARSGWYVWHQRRHQINRRQRFRLVCDNVIREAFSDAKQRYGAPRLTDELRAQGYQF
NVKTVAASLRRQGLRAKASRRFRPVSYREHGLPVSENLLKQDFCASGPKQKWVDNITYLRTGEGWLDLAVVIELWSRSVI
GWSMSSRMTAQLACDALQMALWRRKCPENVIVHTDRGGQYCSTDYQSLLKRHNRRGSMSARDCCYDNACAESFFHTLKVE
CIHGEDFVSREIMRTAVFNHSECDYNRWRRHSACGGLSPEQFENQNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 9e-108 83
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-107 82
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 1e-106 82
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-104 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeAg_B1118 YP_002146026.1 ISEc16, orfB VFG1631 Protein 1e-104 79