Gene Information

Name : SeAg_B1117 (SeAg_B1117)
Accession : YP_002146025.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Unknown
Product : IS3 OrfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1122294 - 1122593 bp
Length : 300 bp
Strand : +
Note : identified by match to protein family HMM PF01527

DNA sequence :
ATGACAAAACCAGCATCAACCACCAAAAAGCCACGCAAGCAGCACACGCCTGAATTTCGTCAGGAAGCCCTGAAACTGGC
TGAACGCATTGAGGTGGCCGCTGCCGCCCGCGAACTTAACCTGTATGAATCACAGCTCCACAACTGGCGAAGCAAACAGC
AAAATCAGCTCTCTTCTTCTGAACGCGAGCAGGAGATGTCCGCTGAGATCACCCGTCTGAAACGTCAACTGGCAGAACGG
GATGAGGAACTGGCCATTCTCCAGAAGGCCCCGACATACTTCGCGAAGCGCCTGAAATGA

Protein sequence :
MTKPASTTKKPRKQHTPEFRQEALKLAERIEVAAAARELNLYESQLHNWRSKQQNQLSSSEREQEMSAEITRLKRQLAER
DEELAILQKAPTYFAKRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 1e-28 85
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 9e-29 85
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 9e-29 85
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 9e-29 85
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 1e-23 81
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 3e-23 81
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 3e-23 81
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 1e-23 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeAg_B1117 YP_002146025.1 IS3 OrfA VFG1632 Protein 1e-23 81
SeAg_B1117 YP_002146025.1 IS3 OrfA VFG0603 Protein 3e-24 81