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Name : clpV (SeAg_B1102) Accession : YP_002146010.1 Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1101046 - 1103781 bp Length : 2736 bp Strand : - Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03345 DNA sequence : ATGATCCAGATTGACTTAGCCACCCTGGTAAAACGGCTTGCTCCCTTCGCGAAACAGGCGCTGGAAGCGGCGGCGTCGGA GTGTATGAGCCAGCAGGCGGCAGAAATTACCGTCGCGCATGTGCTGCTACAGATGCTGGCGACCCCGCGCAGCGACTTTC GGGTGATTGCCGAACGTGCGGAGATCGGCGCCGATGATTTACGCCAGGCGCTGACGGTGGAAAATTACGCTGCCGCCCGT TCATCTGACAGCTACCCGTCGTTTTCCCCGATGCTGGTTGAATGGCTGAAAGAGGCCTGGCTGCTGGCCTCCGCGGAAAT GCAGCAGACCGAACTGCGCGGCGGCGTGCTGCTGCTCGCCCTGCTGCATTCGCCGTTGCGCTACCTGCCGCCCGCCGCCG CCCGGCTGCTCACCGCCATCAACCGCGACCTGCTCCGGCAGGATTTTGCCGGGTGGACGAAGGAGTCCGCCGAATCGGTG ATCCTGAATGCGGACGGGCAGGCCGCCAGCGCCATAGCCGATACCGGCGACACCCTGCTGGCCCGCTATGCCAAAAACAT GACCGACGATGCCCGCCAGGGACGGCTTGATCCGGTGCTGTGCCGCGATAACGAAATTGACCTGATGATCGATATCCTCT GCCGCCGCCGTAAAAATAACCCGGTGGTGGTGGGCGAAGCGGGCGTGGGCAAAAGCGCGCTGATTGAAGGGCTGGCGCTG CGCATTATTGCCGGTCAGGTGCCGGACAAGCTGCGCGATACCGATATTATGACGCTGGATCTCGGCGCCTTGCAGGCGGG CGCGTCGGTAAAAGGCGAGTTTGAGAAGCGCTTTAAGGGGCTGATGGCGGAAGTCATTCAGTCGCCGAAACCCGTCATCC TGTTTATCGACGAAGCCCACACGCTGATTGGCGCGGGCAACCAGCAGGGCGGGCTGGATATCTCCAACCTGCTGAAACCA GCGCTGGCGCGCGGCGAACTGAAAACCATCGCCGCCACCACCTGGAGCGAATACAAAAAATACTTCGAGAAAGACGCCGC CCTGTCGCGCCGTTTCCAGTTAGTGAAAGTCAGCGAACCCAATGCTGCCGAAGCCACCATTATCCTGCGCGGCCTGTCGG CGGTGTATGAGCAGTCCCACGGCGTGCTGATTGACGATGAAGCGTTACAGGCCGCCGCGACGTTAAGCGAGCGCTACCTG TCAGGCCGCCAGTTGCCGGATAAGGCCATTGATGTGCTGGATACCGCCTGCGCCCGCGTGGCGATTAACCTTTCGTCGCC GCCGAAGCAAATTTCGGCGCTGACGACTCTGCGCCACCAGTGTGAAGCTGAAATACGCCAGCTTGAGCGCGAAATTCGCA TCGGCCTGCGGTCGGATACTTCACGGCTGACTGAAGTTATCGTTCAGTATGACGAAACGCTGACCGAACTGGATGCGCTG GAGGCCGCGTGGCGCCAGCAGCAGACGCTGGTGCAGGAAATTATCGCGCTGCGTAAGGGGCTGCTGGACGAAACGGACGC TACCGGCAACGATGAAACCGCAACGCCTGAAACAGAGGCTGTGGGCAGTGACGATGAATCCGTCACAGCGCCGCCGGAAG CGGAACCTGAAATTTCGCCCGCCGCCCGCCTCGCGCAGCTCACCGCCGAACTGGACGCCCTGCACCACACGCAACTGCTG GTCTCCCCGCACGTCGATAAAAAACAGATAGCCAGCGTGATTGCCGAATGGACCGGCGTGCCGCTTAACCGCCTGTCACA AAACGAAATGTCGGTCATCACCGACCTGCCGCAGTGGCTGGGCGACACCATCAAAGGCCAAGCGCTGGCGATTAAGCACC TGCATAAACACCTGCTGACCGCCCGCGCCGATCTGCGCCGTCCGGGACGTCCGCTCGGCGCGTTCCTGCTGGCCGGTCCC AGCGGTGTCGGCAAAACCGAAACCGTGCTGCAACTGGCCGAACTGCTCTACGGCGGTCGCCAGTACCTGACCACCATCAA CATGTCGGAGTTTCAGGAAAAACACACCGTTTCACGCCTGATTGGTTCCCCGCCGGGCTATGTCGGCTACGGCGAAGGCG GCGTGCTGACCGAAGCGATTCGCCAGAAACCGTACTCCGTGGTGCTGCTCGACGAGGTGGAGAAAGCCCACCCGGACGTG CTCAACCTGTTCTACCAGGCGTTCGACAAGGGCGAGATGGCCGACGGCGAAGGCCGTCTTATCGACTGCAAAAATGTGGT GTTCTTCCTCACCTCCAACCTCGGTTATCAGGTGATTGTCGAACATGCCGACAACCCGGAAGCCATGCAGGAAGCACTGT ACCCGGTACTGGCGGATTTCTTTAAACCGGCGCTGCTGGCGCGTATGGAAGTGGTGCCGTACCTGCCGTTATCTAAAGAA ACGCTTGCCGTCATTATCGCCGGGAAGCTGGCGCGGCTGGACAACGTGCTGCGCGCCCGCTTCGGCGCGGAGGTGGTGAT TGAGCCGGACGTGACTGACGAAATCATGCAGCGCGTCACCCGCGCCGAAAACGGCGCGCGGATGCTGGAGTCGGTCATCG ACGGCGAGATGCTGCCGCCGCTCTCCCTGCTGCTGTTGCAGAAAATGGCGGCGAATATCGCCATCGCCCGTATCACGCTG GGCGTGGCAAACGGCGCGTTTACCGCGGATGTGGAGGATGTGCCGGATGAGGATACTCAGCCCGTAGCGGAAACAGAGGA CGAAGCCGTTCTATGA Protein sequence : MIQIDLATLVKRLAPFAKQALEAAASECMSQQAAEITVAHVLLQMLATPRSDFRVIAERAEIGADDLRQALTVENYAAAR SSDSYPSFSPMLVEWLKEAWLLASAEMQQTELRGGVLLLALLHSPLRYLPPAAARLLTAINRDLLRQDFAGWTKESAESV ILNADGQAASAIADTGDTLLARYAKNMTDDARQGRLDPVLCRDNEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLAL RIIAGQVPDKLRDTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIQSPKPVILFIDEAHTLIGAGNQQGGLDISNLLKP ALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNAAEATIILRGLSAVYEQSHGVLIDDEALQAAATLSERYL SGRQLPDKAIDVLDTACARVAINLSSPPKQISALTTLRHQCEAEIRQLEREIRIGLRSDTSRLTEVIVQYDETLTELDAL EAAWRQQQTLVQEIIALRKGLLDETDATGNDETATPETEAVGSDDESVTAPPEAEPEISPAARLAQLTAELDALHHTQLL VSPHVDKKQIASVIAEWTGVPLNRLSQNEMSVITDLPQWLGDTIKGQALAIKHLHKHLLTARADLRRPGRPLGAFLLAGP SGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDV LNLFYQAFDKGEMADGEGRLIDCKNVVFFLTSNLGYQVIVEHADNPEAMQEALYPVLADFFKPALLARMEVVPYLPLSKE TLAVIIAGKLARLDNVLRARFGAEVVIEPDVTDEIMQRVTRAENGARMLESVIDGEMLPPLSLLLLQKMAANIAIARITL GVANGAFTADVEDVPDEDTQPVAETEDEAVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 0.0 | 86 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 0.0 | 86 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-123 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV | YP_002146010.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 0.0 | 59 |
| clpV | YP_002146010.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 2e-132 | 42 |
