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Name : hpcD (SeAg_B1063) Accession : YP_002145973.1 Strain : Salmonella enterica SL483 Genome accession: NC_011149 Putative virulence/resistance : Unknown Product : 5-carboxymethyl-2-hydroxymuconate delta-isomerase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3232 EC number : 5.3.3.10 Position : 1061826 - 1062206 bp Length : 381 bp Strand : + Note : identified by match to protein family HMM PF02962 DNA sequence : ATGCCGCACTTTATTGCTGAATGTACTGAAAATATTCGCGAGCAGGCTGATTTACCCGGCTTGTTCAGCAAGGTAAACGA GGCGCTGGCCGCCAGCGGGATTTTCCCCATTGGCGGTATCCGCAGTCGCGCCCACTGGCTGGATACCTGGCAGATGGCTG ACGGTAAGCATGATTACGCGTTTGTGCATATGACGCTGAAAATCGGCGCCGGGCGCAGCCTGGAGAGCCGTCAGGAAGTC GGCGAAATGCTGTTTGGGCTGATTAAAGCCCACTTCGCCGACCTGATGGAGAACCGCTATCTGGCGCTGTCGTTTGAGAT TGCCGAGTTACATCCAACGCTCAATTACAAACAAAACAACGTACACGCGTTATTTAAATAG Protein sequence : MPHFIAECTENIREQADLPGLFSKVNEALAASGIFPIGGIRSRAHWLDTWQMADGKHDYAFVHMTLKIGAGRSLESRQEV GEMLFGLIKAHFADLMENRYLALSFEIAELHPTLNYKQNNVHALFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaF | AAO17181.1 | HpaF | Not tested | tcd island | Protein | 2e-48 | 81 |
